Tag | Content |
---|
EnhancerAtlas ID | HS177-13378 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr2:232545430-232546240 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
KLF5 | MA0599.1 | chr2:232545753-232545763 | GCCCCGCCCC | + | 6.02 | KLF5 | MA0599.1 | chr2:232545828-232545838 | GGGGCGGGGC | - | 6.02 | NR2C2 | MA0504.1 | chr2:232546196-232546211 | CAGGGGCAGAGGGCA | + | 6.1 |
|
| Number of super-enhancer constituents: 51 | ID | Coordinate | Tissue/cell |
SE_00956 | chr2:232544767-232546720 | Adrenal_Gland | SE_02118 | chr2:232544087-232546796 | Aorta | SE_03344 | chr2:232545192-232545726 | Brain_Angular_Gyrus | SE_03344 | chr2:232545994-232546821 | Brain_Angular_Gyrus | SE_03959 | chr2:232544494-232545795 | Brain_Anterior_Caudate | SE_03959 | chr2:232545842-232554771 | Brain_Anterior_Caudate | SE_05028 | chr2:232543170-232554922 | Brain_Cingulate_Gyrus | SE_05842 | chr2:232541943-232555005 | Brain_Hippocampus_Middle | SE_06810 | chr2:232544452-232554939 | Brain_Hippocampus_Middle_150 | SE_08041 | chr2:232543123-232554844 | Brain_Inferior_Temporal_Lobe | SE_08891 | chr2:232546084-232546708 | Brain_Mid_Frontal_Lobe | SE_10218 | chr2:232545135-232545741 | CD19_Primary | SE_11120 | chr2:232544737-232547631 | CD20 | SE_23069 | chr2:232544600-232546692 | Colon_Crypt_1 | SE_23744 | chr2:232544695-232546657 | Colon_Crypt_2 | SE_24686 | chr2:232544570-232546767 | Colon_Crypt_3 | SE_26538 | chr2:232544364-232546792 | Esophagus | SE_27945 | chr2:232544498-232546934 | Fetal_Intestine | SE_28950 | chr2:232544502-232547988 | Fetal_Intestine_Large | SE_30147 | chr2:232544617-232550071 | Fetal_Muscle | SE_31275 | chr2:232544530-232550869 | Fetal_Thymus | SE_31583 | chr2:232544174-232548904 | Gastric | SE_32771 | chr2:232544351-232546712 | H1 | SE_34301 | chr2:232544454-232548122 | HCT-116 | SE_34676 | chr2:232544250-232547084 | HeLa | SE_40924 | chr2:232544553-232546943 | Left_Ventricle | SE_42371 | chr2:232544090-232546861 | Lung | SE_47005 | chr2:232545023-232546697 | Ovary | SE_47674 | chr2:232545060-232546729 | Pancreas | SE_48427 | chr2:232544694-232546907 | Psoas_Muscle | SE_48956 | chr2:232544696-232546845 | Right_Atrium | SE_49615 | chr2:232545078-232546690 | Right_Ventricle | SE_50073 | chr2:232544557-232546795 | Sigmoid_Colon | SE_51193 | chr2:232544561-232547019 | Skeletal_Muscle | SE_52583 | chr2:232544547-232546785 | Small_Intestine | SE_53812 | chr2:232545094-232546824 | Spleen | SE_54893 | chr2:232544538-232547016 | Stomach_Smooth_Muscle | SE_55415 | chr2:232545096-232546704 | Thymus | SE_56815 | chr2:232544499-232546871 | VACO_400 | SE_57401 | chr2:232544593-232545790 | VACO_503 | SE_57401 | chr2:232545876-232546687 | VACO_503 | SE_57994 | chr2:232544589-232546746 | VACO_9m | SE_58398 | chr2:232468621-232552645 | Ly1 | SE_60442 | chr2:232526263-232553020 | DHL6 | SE_61093 | chr2:232461681-232552859 | HBL1 | SE_61422 | chr2:232466061-232552901 | Toledo | SE_62587 | chr2:232525960-232546908 | Tonsil | SE_65285 | chr2:232544445-232545981 | Pancreatic_islets | SE_65285 | chr2:232546004-232550932 | Pancreatic_islets | SE_66935 | chr2:232543781-232552771 | H2171 | SE_68691 | chr2:232543695-232548708 | H9 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr2 | 232545873 | 232546005 | chr2 | 232545684 | 232546083 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH02I231679 | chr2 | 232543970 | 232550510 |
|
Enhancer Sequence | TCCCTGAGCC GTCTTTCAGC CTGCGGCCTC CTCCACTAAC TGGTCTTACC CCAACCCGCC 60 CTCTCCAATG TCCCCTGTTC TCTGAGCGCT CTCCCAGTCC AGCCACCAGC CACGGCCAGG 120 CCCAGGACGG AGTCGCTTTC TGGGCCCCGT CCCGTGCCCA TCGGGCTTTT CCCCCACAGC 180 GGTGGCCCAG CCCCTGCTTG GACCCCGGGG ACTCCGAGCG CAGCTGGGCC GGGGGTGGCA 240 GCGGGGGAGG CCGGTGCACA GGTTGCCGGA CCGCGGCGGG GGCAGGCGGC GGAGGCTGGG 300 CGGGAACCCG ACTCTGGGCC CGCGCCCCGC CCCGGCGCAG ATGGCGGCGG CGCGGGCTGG 360 TCCCGGGCCG CCGCTGGGGG CTCGGGTTTC GGCCGAGAGG GGCGGGGCGA GCGCCTGGGG 420 GCCCCGGGGA GGCTGCGGCC CAATCACTGC CCGGCCCGGA CGCTGCCCCC GACCCCGGCC 480 TCCAATCACT GCCTGGCCGG ACCGCCCCCG CTCCGCTGCG TCCTTTGTTC CCGCTCCCCT 540 CTGCCTTCCC GGGCGCCCCG CTCCGGCCCT GCGGCTTCCG GCCCGCGCGG ACCCTGCCGT 600 GTGGACGCGT GTGGGCTGCG CCCGCCCCGG GCGCACTCCG GGCCCCAACG CCAGGCACAG 660 GCCCGCTTGT GGCTGGGCAC GCTCGTGTGC CCTTGGCGGC CCCGGGCGCT TCGGAGGGCC 720 TGGCCAAAGC TCCCAGAAGA GCCCTTTGGA GGGACTGAAC TTTGACCAGG GGCAGAGGGC 780 AACGGAGGAA TCCAGGACCC GGGCAGTGTC 810
|