| Tag | Content |
|---|
EnhancerAtlas ID | HS177-13269 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr2:218802080-218802520 |
Target genes | | Number: 13 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RARA(var.2) | MA0730.1 | chr2:218802336-218802353 | AGGTCAATCCAAGGTGA | + | 6.14 | | ZNF263 | MA0528.1 | chr2:218802313-218802334 | GGGGCAGGGCGGGGAGGGAAG | + | 6.41 |
|
| | Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
| SE_00005 | chr2:218749169-218810848 | Adipose_Nuclei | | SE_00853 | chr2:218797442-218803745 | Adrenal_Gland | | SE_01533 | chr2:218790723-218809422 | Aorta | | SE_02835 | chr2:218797452-218802706 | Astrocytes | | SE_02897 | chr2:218801687-218802724 | Bladder | | SE_04023 | chr2:218796939-218803023 | Brain_Anterior_Caudate | | SE_05119 | chr2:218800937-218803246 | Brain_Cingulate_Gyrus | | SE_05795 | chr2:218790958-218814655 | Brain_Hippocampus_Middle | | SE_07532 | chr2:218801592-218802740 | Brain_Hippocampus_Middle_150 | | SE_08301 | chr2:218800989-218802532 | Brain_Inferior_Temporal_Lobe | | SE_25781 | chr2:218782377-218810766 | Duodenum_Smooth_Muscle | | SE_26522 | chr2:218779494-218809405 | Esophagus | | SE_30619 | chr2:218800891-218803795 | Fetal_Muscle | | SE_31466 | chr2:218797375-218803314 | Gastric | | SE_37423 | chr2:218797315-218803080 | HSMMtube | | SE_40583 | chr2:218761671-218809601 | Left_Ventricle | | SE_46178 | chr2:218797701-218803015 | Osteoblasts | | SE_46622 | chr2:218801527-218803227 | Ovary | | SE_47481 | chr2:218801879-218803193 | Pancreas | | SE_48107 | chr2:218791336-218809391 | Psoas_Muscle | | SE_48552 | chr2:218791081-218809387 | Right_Atrium | | SE_49441 | chr2:218797474-218803702 | Right_Ventricle | | SE_50265 | chr2:218797048-218809390 | Sigmoid_Colon | | SE_51152 | chr2:218791005-218809355 | Skeletal_Muscle | | SE_52433 | chr2:218790973-218803772 | Small_Intestine | | SE_53299 | chr2:218792085-218809367 | Spleen | | SE_54481 | chr2:218753378-218811875 | Stomach_Smooth_Muscle | | SE_65278 | chr2:218797162-218803589 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH02I217926 | chr2 | 218791134 | 218803703 |
|
Enhancer Sequence | AGGCACTGCC CCGGACCCAA GGAGCCAACC CCTGGGGCTG GCCCATCTCT GCCACCCCCA 60
AATCATAGCC CGAACCCCAG CTCATGTCCC TGGGTGGAGG CTTCTCCCCA TGCCAGCCCC 120
CCTTCCTGGC TTGGCGGCCC CTCTCACTCA ACCAGCTCTG CCATTTCTGG GAGTCTCAGC 180
CGGTGATTAG GGCCCTAATC AGCAGGACTT CCTGCCAGCG ACTGCCAGAG TTGGGGGCAG 240
GGCGGGGAGG GAAGCAAGGT CAATCCAAGG TGAAGTTCCA CAGCGTTGGG ACTGGGGGAC 300
GCCCAGCAGA GGCCCCGGGG AGATGGACTC ACAGACCCCC CACCCCTGCA CCTTTCAGCC 360
CTTCATTTAC AGTTGAGGGC ACTGAGGCCC AGCGAGAGAA GGGACTCAGG TGGGACTCCT 420
CCAGAGGCTA GGGACAGAGC 440
|
