EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS177-12854 
Organism
Homo sapiens 
Tissue/cell
SK-N-SH_RA 
Coordinate
chr2:175473160-175473600 
Target genes
Number: 11             
NameEnsembl ID
TF binding sites/motifs
Number: 6             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
LMX1BMA0703.2chr2:175473266-175473277AATTTAATTAA+6.32
LMX1BMA0703.2chr2:175473269-175473280TTAATTAAAAT-6.62
PHOX2AMA0713.1chr2:175473265-175473276TAATTTAATTA+6.62
PROP1MA0715.1chr2:175473265-175473276TAATTTAATTA-6.32
PROP1MA0715.1chr2:175473265-175473276TAATTTAATTA+6.62
Phox2bMA0681.1chr2:175473265-175473276TAATTTAATTA+6.62
Number of super-enhancer constituents: 24             
IDCoordinateTissue/cell
SE_04753chr2:175471965-175473312Brain_Anterior_Caudate
SE_05758chr2:175470169-175474022Brain_Cingulate_Gyrus
SE_09218chr2:175470141-175477071CD14
SE_10373chr2:175471990-175477435CD19_Primary
SE_10908chr2:175440856-175502246CD20
SE_12033chr2:175471990-175474857CD3
SE_14618chr2:175472064-175476515CD4_Memory_Primary_7pool
SE_15552chr2:175472273-175474218CD4_Memory_Primary_8pool
SE_16370chr2:175472530-175473672CD4_Naive_Primary_8pool
SE_17112chr2:175472125-175474300CD4p_CD225int_CD127p_Tmem
SE_17386chr2:175469991-175477386CD4p_CD25-_CD45RAp_Naive
SE_17852chr2:175470127-175477017CD4p_CD25-_CD45ROp_Memory
SE_18326chr2:175470015-175477077CD4p_CD25-_Il17-_PMAstim_Th
SE_19651chr2:175472147-175474141CD4p_CD25-_Il17p_PMAstim_Th17
SE_20138chr2:175472143-175474138CD56
SE_22339chr2:175470030-175476810CD8_primiary
SE_25684chr2:175473057-175473991DND41
SE_32656chr2:175470334-175476979GM12878
SE_43829chr2:175472084-175474849MM1S
SE_58484chr2:175442743-175501854Ly1
SE_59799chr2:175455191-175487657Ly4
SE_60814chr2:175453408-175481611DHL6
SE_61493chr2:175457452-175474388Toledo
SE_62249chr2:175446502-175501370Tonsil
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr2175473281175473435
Number: 1             
IDChromosomeStartEnd
GH02I174605chr2175470567175477081
Enhancer Sequence
TGGAACATCA CTTGCCTTAT TTCTTTGAAG AGAAAATGAT TTCACATGTG GAAAGACCAT 60
TCATGTTTTT TTCTTTTTTT TTTCTAAGCA CTATCTTGTC TTAGGTAATT TAATTAAAAT 120
GCAAACATTT CCCAGTTACC AGCATCCAAT ATAAGTGGCC CCCAGGGGAA AACCCATGTG 180
AATGATAGAA AGAGGCTTCT TGCAACCCAA GGGAGAAACT GGTGGAAAGC CCCATTTTCA 240
CATCCTGCCA GGTACATACT TGTGCACACA CACTGAGAGA AGCTGCTGGC ATGAAGATAG 300
CTGTGTGTTC CCTATGGTTG CTAATCATTA GGTATAAAGG CCAGAATGGG CCTTTACAAT 360
TACTTCTGGG CTGGTGAAAG TAGCCATATT GTTCCTTATT CAGACTTCTC TGTAGCTAAA 420
TGGCTACTCA GTATCACCTG 440