| Tag | Content |
|---|
EnhancerAtlas ID | HS177-12235 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr2:85726160-85726710 |
Target genes | | Number: 12 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr2:85726570-85726585 | GAGGTCAGAAGTTCA | + | 6.38 | | RARA | MA0729.1 | chr2:85726570-85726588 | GAGGTCAGAAGTTCAAGA | + | 6.88 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_27222 | chr2:85725704-85726400 | Esophagus | | SE_34228 | chr2:85725898-85726511 | HCC1954 | | SE_41172 | chr2:85725807-85726686 | Left_Ventricle | | SE_42782 | chr2:85725827-85726959 | Lung | | SE_47246 | chr2:85724711-85729191 | Panc1 | | SE_50398 | chr2:85725903-85726482 | Sigmoid_Colon | | SE_52637 | chr2:85725921-85726934 | Small_Intestine |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH02I085497 | chr2 | 85724655 | 85729357 |
|
Enhancer Sequence | CCACCACCTC CTGGCCTCGA GTCATCCTCC CACCTCACCC TCCTGATTAG CCAGAACTAT 60
AGGTGCACAC CACCACGCCT GGCTAATTTT TGTATTTTTT TGTAGAGACA GGGTTTCAAC 120
ATACTGCCCA AGCTGGTCTT GAACTCCTGG GCTCAAATGA TCCGCTCTCC TTGGCCTGCC 180
AAAGTGCAGG GATTAGAGGC GTGAGTCACC ACGCCCAGCC CATTTTCCTT TTCCTGTCCA 240
TAAATTCCTC TCTGACCACA TGGCAGCATC AGAGTCCCTC TGGTTCAGGG AGTTACCGGA 300
TTCATGAATC ATTCTTTGCT CAATTAAACT CTGTTAACTT TAATATGTCT AAAATTTTTC 360
TGGCTGGGCA TGGTGGCTCA TGCCTGTAAT CCCAGGCGGG TGGATCACCT GAGGTCAGAA 420
GTTCAAGACC AGCCTGGCCA ACATGGTGAA ACCCTGTCTC TACTAAAAAT ACAAAAATCA 480
GCTGGATATG GTGGTGGTGC CTGTAATTCC AGCTACTTAG GAGGCTGAGG CAAGAGAAAC 540
ACTTGAACCC 550
|
