Tag | Content |
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EnhancerAtlas ID | HS177-12001 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr2:54760030-54760670 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF2 | MA0051.1 | chr2:54760456-54760474 | GGAAAGTGAAACCCAGGC | + | 6.8 |
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| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_00006 | chr2:54756483-54765677 | Adipose_Nuclei | SE_07789 | chr2:54759427-54762594 | Brain_Inferior_Temporal_Lobe | SE_23128 | chr2:54760046-54760783 | Colon_Crypt_1 | SE_25070 | chr2:54759741-54760836 | Colon_Crypt_3 | SE_27627 | chr2:54758268-54763136 | Fetal_Intestine | SE_28537 | chr2:54756686-54763224 | Fetal_Intestine_Large | SE_35875 | chr2:54757789-54762616 | HMEC | SE_42137 | chr2:54760107-54760762 | Lung | SE_50115 | chr2:54759619-54760684 | Sigmoid_Colon | SE_52386 | chr2:54760045-54760708 | Small_Intestine | SE_56813 | chr2:54760130-54760808 | VACO_400 | SE_61474 | chr2:54749764-54818736 | Toledo | SE_64270 | chr2:54757826-54762203 | NHEK |
|
| Number: 1 | ID | Chromosome | Start | End |
GH02I054530 | chr2 | 54757824 | 54762651 |
|
Enhancer Sequence | TTCTTTCCTT CTTAACTATT TCTCGGATAG AAGATTCATT CTTAACATAG ACCTTATCAT 60 TATAGGATTT TTTTTTCTTT TCTTGTTGAG AACTTTTACT TTTTCACTTA AAGGAAGCAT 120 TTGACAGTCG CTTCTTTTTA GCATATCTGA ATTGCCAGCC CAGGGCCATT ATTAAGTCAA 180 ATAAGGGTTA CCTGACAGTT AATCTGATAA TCAAGACGGC TGCTAAGTGA CTAACAGGGA 240 GCGTCTGCAG TGTGTGTCTG CTGGACAAAG GGATGATTCA CATACCAGGC GGGATGGAGC 300 GAGATGGCGC AAGATTTCAT CACAGTGCTC AGGATGGCAT GCAATTTAAA ACGTATGAAT 360 TGCCTATTTC TTCAGTTTTT CATTTCATAT TTCCAGACCA TGGTTGACTG AAGGTAACTG 420 AACCATGGAA AGTGAAACCC AGGCTAAAGG GGACTAGTGT GTGTGTGTGT GTGTGTGTGT 480 GTGTGTGTGT GTGTGTGTGT GTCTAAACCA TTTGACTTCT AGTGAACGAA CAGAGCCAAC 540 CTCTTCCTGA ATATGTAAAG AAATCTATAA AACATGGCCT AGAATGATCT AATTAGGAGG 600 AGGAAACCTA TTTACATGAG ACTATATATG TATACAAGTG 640
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