EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-11963

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr2:47571350-47572030

Target genes

Number: 18
Name	Ensembl ID

SOCS5	ENSG00000171150
RP11	ENSG00000260977
AC016722.1	ENSG00000222005
AC016722.2	ENSG00000239332
AC016722.4	ENSG00000228925
TTC7A	ENSG00000068724
MCFD2	ENSG00000180398
AC093732.1	ENSG00000233845
AC073283.7	ENSG00000225187
C2orf61	ENSG00000239605
CALM2	ENSG00000143933
AC106869.2	ENSG00000226087
BCYRN1	ENSG00000236824
AC073283.4	ENSG00000234690
EPCAM	ENSG00000119888
7SK	ENSG00000222685
MSH2	ENSG00000095002
RPL36AP15	ENSG00000235369

dbSUPER

Number of super-enhancer constituents: 13
ID	Coordinate	Tissue/cell

SE_04034	chr2:47571871-47573447	Brain_Anterior_Caudate
SE_04923	chr2:47571257-47573593	Brain_Cingulate_Gyrus
SE_06205	chr2:47571262-47573563	Brain_Hippocampus_Middle
SE_06891	chr2:47571097-47573642	Brain_Hippocampus_Middle_150
SE_07961	chr2:47571475-47573457	Brain_Inferior_Temporal_Lobe
SE_23147	chr2:47571143-47571650	Colon_Crypt_1
SE_23147	chr2:47571740-47572295	Colon_Crypt_1
SE_24789	chr2:47571242-47571675	Colon_Crypt_3
SE_27702	chr2:47569473-47574751	Fetal_Intestine
SE_28615	chr2:47569379-47574795	Fetal_Intestine_Large
SE_50655	chr2:47571247-47574617	Sigmoid_Colon
SE_52751	chr2:47571253-47573475	Small_Intestine
SE_56979	chr2:47571935-47573022	VACO_400

Enhancer Sequence

CCCAGGCTGA CTCCAAGTTT TAATACCTCA GGTAGGAAAA GGAGGAGAGT GTTAGTAAAA 60
TGTTTGCCGT TGAATTTCAC CAGCGTAAAA ACAACATTCT GGGAAATAAT TATCTGCACT 120
TCAGTTCTTT GGGGTGGTAC CGGAGGGAAT CTTTACAAAG GTGGTATTAA TGGAGAAGAG 180
GAAGGGAAGG ATCCTTAGTG ATGGGTTGTT TTTCCAAGCA CCTCGATCTA GTGGATTTCC 240
TTTTTTTTTT TTTGAGATGG AGTTTCGTTT TTGTCGCCCA GGCTGGAGTG CAATGGCGCG 300
ATCTCGGCCC ACTGCAACCT CCGCCTCCCA GGTTCAGGCG ATTCTCCAGC CTCAGCCTCC 360
GGAGTAGCTG GGATTACAGG CACTCACCAC CACGCCCAGC TAATTTTTGT ATTTTTAGTA 420
GAGACGGGGT TTTGCCATGT TGGCCAGGCT GGTCTCAAAC TGATCCGCCC ACATTGGCCT 480
CCCAAAGTGC TGGGATTATA GGTATGAGCC ACCACGCCCA GCCAGTATTT CCTATAAATA 540
AATGCTCCTA TAAATAAATA GTACAAATAC CTTTCCAAAT CTGAGAACTA CTAGTGAGCA 600
TCAGTTTTAG AGATAAATAG AACAAAGCTC CTTTTCTGCA GTAAGAATAT ATTAGCTTAA 660
TGTTGCTTTT TAAAAAAGTT 680