EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-11949

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr2:47313380-47314120

Target genes

Number: 23
Name	Ensembl ID

RHOQ	ENSG00000119729
CRIPT	ENSG00000119878
PIGF	ENSG00000151665
SOCS5	ENSG00000171150
RP11	ENSG00000260977
AC016722.1	ENSG00000222005
AC016722.2	ENSG00000239332
AC016722.3	ENSG00000226548
AC016722.4	ENSG00000228925
TTC7A	ENSG00000068724
MCFD2	ENSG00000180398
AC093732.1	ENSG00000233845
AC073283.7	ENSG00000225187
C2orf61	ENSG00000239605
CALM2	ENSG00000143933
AC106869.2	ENSG00000226087
BCYRN1	ENSG00000236824
AC073283.4	ENSG00000234690
EPCAM	ENSG00000119888
7SK	ENSG00000222685
MSH2	ENSG00000095002
AC138655.6	ENSG00000236558
AC079250.1	ENSG00000230979

dbSUPER

Number of super-enhancer constituents: 18
ID	Coordinate	Tissue/cell

SE_00056	chr2:47310151-47314830	Adipose_Nuclei
SE_00864	chr2:47312568-47313783	Adrenal_Gland
SE_04790	chr2:47312138-47314539	Brain_Cingulate_Gyrus
SE_05773	chr2:47309459-47314534	Brain_Hippocampus_Middle
SE_06717	chr2:47310294-47314619	Brain_Hippocampus_Middle_150
SE_11417	chr2:47312517-47314412	CD20
SE_24243	chr2:47313106-47313485	Colon_Crypt_2
SE_26616	chr2:47312948-47313698	Esophagus
SE_29869	chr2:47313278-47314210	Fetal_Muscle
SE_40895	chr2:47312152-47314785	Left_Ventricle
SE_42152	chr2:47310328-47314824	Lung
SE_45773	chr2:47313313-47314465	Osteoblasts
SE_46767	chr2:47313445-47314142	Ovary
SE_50293	chr2:47312478-47314565	Sigmoid_Colon
SE_51389	chr2:47312665-47314894	Skeletal_Muscle
SE_52551	chr2:47312269-47314697	Small_Intestine
SE_53323	chr2:47310581-47314980	Spleen
SE_54495	chr2:47313232-47314269	Stomach_Smooth_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH02I047083

chr2

47310340

47314790

Enhancer Sequence

GGCAGCTTCC TGAAACTACA GCTCGTCTTC CTGTTGGAAC TGCCATCCAC GTGAGGGCAG 60
CCCCTTAGCT TCAAACACAG GGCAACTGGC AGGAGATCCT TGGCACAGCT TGTATGGCCT 120
TCCCCCAGCC GGCACTATCC CACACTCCAT TTCCGGCACA ACCCTCCCCA AACTCAGTCA 180
CGTGCCTCAT TCATCTTTGT TTCAAGACTC CACTCTCCAA CCCCAGCTCA GCACCTTGCA 240
CATAGCAGAT ACTCAAAATG TTGTTGACTT GAAAACACAA ATATTCATCA GGTTGAATCA 300
ATATTGTTCT TTTCAGGGGA TTCAAAGAGA GAAAGAACCA GTTTTGGGGA TGCTGTGACG 360
CTCAGCTTGG CCTCTGATTA ATGCTGACCG CCCACGGAAG TCTTCAAGAG GGCCATGAGG 420
CCTTATAACC CTGATGCAGT TGAGTTCCAG CTAGAGAGAA CAAGGCCACA CAGAGCAGAG 480
ACCAGACATC TCAGGGCCTG TCTGAGAGCA GCCCGGGGCA CAGTCTGTCC GAATCTGCTC 540
TTTGGTAATA AGCATAGTGA ACACATAATT TATTGCTCAG ACCAGGACAC TTTTGAGAGA 600
GAACTGGTAA TTATGCTGGG ACTATCCCAG ATAAGCAAGC AGGACAGTCA CCTCAAGCAA 660
TCAATCATGT TTTGTGGCCA GACCCCTCCA AGGAATAGAC AAAATACAGT TTTCTAAACA 720
TGAGAACGTA CTAAACCTCA 740