| Tag | Content |
|---|
EnhancerAtlas ID | HS177-11940 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr2:47229530-47230220 |
Target genes | | Number: 20 | Name | Ensembl ID |
|
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RFX1 | MA0509.2 | chr2:47229897-47229913 | TGTTGCCATGGTTACA | - | 6.94 | | RFX1 | MA0509.2 | chr2:47229897-47229913 | TGTTGCCATGGTTACA | + | 6.95 | | RFX2 | MA0600.2 | chr2:47229897-47229913 | TGTTGCCATGGTTACA | + | 6.77 | | RFX2 | MA0600.2 | chr2:47229897-47229913 | TGTTGCCATGGTTACA | - | 6.83 | | RFX5 | MA0510.2 | chr2:47229897-47229913 | TGTTGCCATGGTTACA | - | 6.14 | | RFX5 | MA0510.2 | chr2:47229897-47229913 | TGTTGCCATGGTTACA | + | 6.27 | | RORA(var.2) | MA0072.1 | chr2:47230175-47230189 | CTGACCTAATTAAC | - | 6.05 |
|
| | Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
| SE_00056 | chr2:47228729-47233257 | Adipose_Nuclei | | SE_00864 | chr2:47228939-47232656 | Adrenal_Gland | | SE_01547 | chr2:47229049-47237427 | Aorta | | SE_03148 | chr2:47228934-47232779 | Brain_Angular_Gyrus | | SE_03864 | chr2:47224295-47237133 | Brain_Anterior_Caudate | | SE_04790 | chr2:47207331-47238050 | Brain_Cingulate_Gyrus | | SE_05773 | chr2:47203345-47237435 | Brain_Hippocampus_Middle | | SE_06717 | chr2:47224482-47237491 | Brain_Hippocampus_Middle_150 | | SE_07731 | chr2:47224149-47237360 | Brain_Inferior_Temporal_Lobe | | SE_08824 | chr2:47229662-47231117 | Brain_Mid_Frontal_Lobe | | SE_09141 | chr2:47226225-47233894 | CD14 | | SE_26122 | chr2:47229467-47230939 | Duodenum_Smooth_Muscle | | SE_26616 | chr2:47229058-47231804 | Esophagus | | SE_48626 | chr2:47229031-47231103 | Right_Atrium | | SE_53323 | chr2:47229516-47230518 | Spleen | | SE_54495 | chr2:47226285-47245145 | Stomach_Smooth_Muscle | | SE_65882 | chr2:47229163-47232588 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH02I047001 | chr2 | 47229032 | 47231739 |
|
Enhancer Sequence | ATTACTTTAA GGGTCACAAG TGCATTCACA TCTGTTACTG CATTTGATCT AGAGGATTTT 60
CTAATGAAAG AAAGCAGGAT TCTGAGGCCA CTTCAATGGT GGAAGGGAAA GAGTGTGGCT 120
GGGACTAGGT CAGAGCTACT CCCAGAGCAT GGGGGTACAC CATGTGGCCT GAGGGCAGTG 180
AGCCAGGGAG GAGGGAGCAG GACAGCTGGG GGTGCTGGGA AGGAACTGAT GCTCCCATAG 240
TGTCTGAGGC CCTGGCCTCA GAGGCTAGCC CTGGCCCCTG AGCTGCACAT TAATTCTGTT 300
CTGCTGTGGC TTACCCACCA GCCCCCATGC CTGCCTTTTC TCTGTCCCAT TTCCCCCTAC 360
CCCTCCCTGT TGCCATGGTT ACACACACAG GCACTGCCCA GCAACCACCA GGAATATTTC 420
ACTTCGGCCC TGCCCCAAAG CCATAGTAAC CACTCAGCCC ACTTCTGCTT CTGGCTGGGG 480
AATCACAGCC CTCTCTTGCA CAGGCCCCAG TTCGCACCAG TCCCTAGGAC CCCCAGGGAG 540
CCTTCCTGGC TGCCTGCCTA TTGAGGGCCT ATCACCAGCC TGAGGATTTG TGCTGCTGCT 600
GCTGCCGCTG CTGCTAGTAT GCTCCTCTCT TCTGTTCCTA TTCTTCTGAC CTAATTAACG 660
CCCGGTTCTG AAAATCCACC CCTCCCTCTG 690
|
