EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-11939

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr2:47227120-47227940

Target genes

Number: 21
Name	Ensembl ID

RHOQ	ENSG00000119729
ATP6V1E2	ENSG00000250565
RP11	ENSG00000250116
CRIPT	ENSG00000119878
PIGF	ENSG00000151665
SOCS5	ENSG00000171150
AC016722.1	ENSG00000222005
AC016722.2	ENSG00000239332
AC016722.4	ENSG00000228925
TTC7A	ENSG00000068724
MCFD2	ENSG00000180398
AC093732.1	ENSG00000233845
AC073283.7	ENSG00000225187
C2orf61	ENSG00000239605
CALM2	ENSG00000143933
AC106869.2	ENSG00000226087
BCYRN1	ENSG00000236824
AC073283.4	ENSG00000234690
EPCAM	ENSG00000119888
7SK	ENSG00000222685
MSH2	ENSG00000095002

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_00864	chr2:47227380-47228768	Adrenal_Gland
SE_01547	chr2:47227342-47228347	Aorta
SE_03148	chr2:47226395-47228737	Brain_Angular_Gyrus
SE_03864	chr2:47224295-47237133	Brain_Anterior_Caudate
SE_04790	chr2:47207331-47238050	Brain_Cingulate_Gyrus
SE_05773	chr2:47203345-47237435	Brain_Hippocampus_Middle
SE_06717	chr2:47224482-47237491	Brain_Hippocampus_Middle_150
SE_07731	chr2:47224149-47237360	Brain_Inferior_Temporal_Lobe
SE_08824	chr2:47227757-47228334	Brain_Mid_Frontal_Lobe
SE_09141	chr2:47226225-47233894	CD14
SE_26616	chr2:47227323-47228738	Esophagus
SE_48626	chr2:47227437-47228254	Right_Atrium
SE_54495	chr2:47226285-47245145	Stomach_Smooth_Muscle
SE_65882	chr2:47227421-47228453	Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH02I046999

chr2

47226396

47228768

Enhancer Sequence

ACCATTCACA ATCTGTGTGG CCTGGTTGAG CTTCTTACCA CCCTGAGCCT CGGTTTTCTC 60
ATCTGTAAAA TGGAGCTAAT AAGATCTTTC TTGTATGACT TTGGTGAATT AAATAAGAAA 120
ATGAATGTGA AGTGCCTGGT ACATTTTGGT TGTTCAATAT GTCCTGATAA ATTTCCTCAT 180
TCTGTCCTGA TAAATACTTG ATTCTGACTT AGTCATTTTT GAAAATGTTC AGGTCTGATT 240
GGGAGATAAA CTGGATTAAG GGTGCCATTC AGTTAAAAAA AAAAAAAAAA GTGCTTCCTG 300
GGCTTGATTC CATTAGGGAT TCAGCAGATG AGCACAGATT GTTTCAGCTT TTGGGATCTG 360
GTTTGTTCTA ACACAAGGCC CTGCTCTGCT GAAGGCTGAA GCGGTGAAGG GTCTGATAAC 420
ACTGCCAGCT TAGAGCCCTT GGTTCAGTGG AGGTGGGAGA GCCTCTCTCT CTAACCGGCA 480
GAAAGAGCTG TTTTTTCTGC TGCAGGAACC TGACGCAGCA GGAGCTCGGA GGCTGGCGTG 540
GGCCTGGCCT GGGTCGCTGG GTGGATGGAA CATGTCACAG AGCATGTTAT TTCTTGGCTC 600
TGTGGACTGG CAGCTCGAGA GCCAGTGGTA ATTATGTCTG CTGGTGGGGA CGACAGCACA 660
GGGGGAGCAT GACAGTGTCC TCCAGGGAGG GGGCAGGTGC TGGGTACAGA TACTGCCAGG 720
AGACTTGTTT CTGGGGTAGT TTTGCGGGGG CTGAGGGTGG CAGCAACAGG CCCTGAGCCT 780
TGTTCCTTGG CCAATGGAGA GCCTGTTTTT GAGAATGCGG 820