EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-11571

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr2:25516000-25516440

Target genes

Number: 12
Name	Ensembl ID

ADCY3	ENSG00000138031
DNAJC27	ENSG00000224165
AC013267.2	ENSG00000240913
SUCLA2P3	ENSG00000229593
RP11	ENSG00000261452
POMC	ENSG00000115138
MIR1301	ENSG00000221445
DNMT3A	ENSG00000119772
AC012074.1	ENSG00000179061
AC012074.2	ENSG00000235072
AC104699.1	ENSG00000224220
DTNB	ENSG00000138101

dbSUPER

Number of super-enhancer constituents: 13
ID	Coordinate	Tissue/cell

SE_01000	chr2:25515266-25518844	Adrenal_Gland
SE_04960	chr2:25515393-25516574	Brain_Cingulate_Gyrus
SE_11782	chr2:25515375-25520049	CD20
SE_11978	chr2:25515297-25516429	CD3
SE_16120	chr2:25515051-25516269	CD4_Naive_Primary_7pool
SE_17410	chr2:25513322-25521175	CD4p_CD25-_CD45RAp_Naive
SE_18044	chr2:25515467-25519802	CD4p_CD25-_CD45ROp_Memory
SE_18504	chr2:25515464-25516375	CD4p_CD25-_Il17-_PMAstim_Th
SE_20422	chr2:25515452-25519878	CD56
SE_22547	chr2:25515037-25520212	CD8_primiary
SE_30251	chr2:25515325-25516276	Fetal_Muscle
SE_53915	chr2:25515174-25516503	Spleen
SE_62755	chr2:25495634-25560501	Tonsil

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH02I025292

chr2

25515471

25520045

Enhancer Sequence

TGACAACAAC GCTGATGCTG TCCCTGTTGT GCCATTGCTA GGGCTTCCTT TCACCCCTTC 60
CTCTCCAGCG TTCCCAGGGC CAGCAGCATA GGCTTGGCCA ATTCTGCCCC GCCACTGCCA 120
CCCCCCACAG GCCCTGGGAC TTTGCTGGCG CCCCTGCCCC CTCCCCTCTC CCAGCATGTG 180
CTCATGCTCA GGGATGAACG CCATGCTCAT GGGTGCCAGA GCCAATTTCT CAAACACGAC 240
TCCCATCACG TCATATCCGC CTCCTCACAA CCTTCCAGAT AACACATTTT TCAGAGAGGA 300
TAAAGAGTAA AAGCCCCTCA GGCTGCCTGC AAACTACCTT TCCAATCAAG ATTGAGAAGA 360
TTTTTCTTCT TTCTTTGAGA CAGGGTTTTG CTCTGTCACC CAGCTGGAGT GCAGTGACAC 420
AATTATGGCT CACTGCAGCC 440