EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-11065

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr19:43967920-43968200

Target genes

Number: 20
Name	Ensembl ID

CD177	ENSG00000204936
TEX101	ENSG00000131126
LYPD3	ENSG00000124466
PHLDB3	ENSG00000176531
ZNF575	ENSG00000176472
ETHE1	ENSG00000105755
XRCC1	ENSG00000073050
L34079.1	ENSG00000124455
AC006276.7	ENSG00000234465
IRGQ	ENSG00000167378
ZNF576	ENSG00000124444
SRRM5	ENSG00000226763
ZNF428	ENSG00000131116
CADM4	ENSG00000105767
AC006953.1	ENSG00000239948
PLAUR	ENSG00000011422
IRGC	ENSG00000124449
SMG9	ENSG00000105771
KCNN4	ENSG00000104783
LYPD5	ENSG00000159871

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr19:43968002-43968012	GGGGCGGGGC	-	6.02
Klf12	MA0742.1	chr19:43967948-43967963	GCTGTGGGCGTGGTC	-	6.07
SP1	MA0079.4	chr19:43968000-43968015	GAGGGGCGGGGCCTC	-	6.13
SP1	MA0079.4	chr19:43967950-43967965	TGTGGGCGTGGTCTC	-	6.54
SP3	MA0746.2	chr19:43967950-43967963	TGTGGGCGTGGTC	-	6.21
SP4	MA0685.1	chr19:43967998-43968015	GGGAGGGGCGGGGCCTC	-	6.07

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_17644	chr19:43966063-43969257	CD4p_CD25-_CD45RAp_Naive
SE_26835	chr19:43964356-43970776	Esophagus

Enhancer Sequence

ACTAGGGAGA GGGACAAGGG CGGGATTAGC TGTGGGCGTG GTCTCAGATG GGGCGTGGCC 60
CAGAGTTGGG TAGGGTCTGG GAGGGGCGGG GCCTCAAATA GGCCAACACC ACAGGACCGA 120
CAGGCAGGAA TTGGCGGATG GACGCCCCCA AAGAGCCGCT CAGAGCGGAA AGAACGACCG 180
AAGCAGGGAG GAGCGGGGTC ACGGAACGGG GGCGGAACCT CAAAGAGCTG AGTCGGAGGA 240
GACAGCCTGG TTGACAGGCA GGGATGGGGA GGTCTCATTG 280