| Tag | Content |
|---|
EnhancerAtlas ID | HS177-11014 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr19:38553430-38554380 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr19:38553479-38553494 | TGAACTCCTGACCTC | - | 6.22 | | ZNF263 | MA0528.1 | chr19:38553832-38553853 | TCCCCTCCACCCCCCTCCCCA | - | 6.35 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_10857 | chr19:38548064-38555238 | CD20 | | SE_33570 | chr19:38547726-38556155 | H2171 | | SE_61973 | chr19:38519548-38571581 | Toledo | | SE_63333 | chr19:38548346-38569687 | NCI-H82 | | SE_65256 | chr19:38551210-38555782 | Pancreatic_islets | | SE_66973 | chr19:38547726-38556155 | H2171 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr19 | 38553516 | 38554338 | | chr19 | 38553666 | 38553907 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I038062 | chr19 | 38553425 | 38555011 |
|
Enhancer Sequence | TTGTATTTTT AGTAGAGACA GAGTTTCACC ATGTTGGTCA GGCTGGTCTT GAACTCCTGA 60
CCTCAGGTGA TCCGCCTGCC GTGGCCTCCC AAAGTGCTGG GATTACGGCC TGCTCTCATT 120
TTTGACAACA GATGTTCTCA AATGGGGTGG CCCCATGAGT TGTCACGAGG GCAGACTCGA 180
GTCAGCCAAT CCCAGGTTCA GATTCCGGCT CCTCCTCCCC TTCTCTTTGT GGCCCTCTCT 240
GAACCCCATT GTGAAGCACG GGTGACAGTA GCAGGTGATT AGAAGCTTCA GTGCAATGGT 300
TTGTGTTATG GTGTCATGTG CTCTGCACAG GGCCTGGCTC CCCGACAGCC CTGGGTCAGG 360
GGCCAGTTAG GATGATGGAT GATTACTGCC AGCAGCTGGG TTTCCCCTCC ACCCCCCTCC 420
CCACTCCAAC CTGGATAACA AGGCCCAGCT GTGTGTGTCC AGCACCTGCA CCGCCCCCGC 480
CGGCCCCCAG CTCCCATCCC TGCCAGCCTT CCCACGGCAG GGAGCCTTCC TGGCTGTGGT 540
GTTCCGGGTG GGCCCCACTG CCGCCCCCCA TCCCCTCAGC CTAGAGCCAT CCTCAGGTTA 600
GGATAAGCAG AGCCGGAGCC ACCCTCAGCC CGGCCCCCAG CGGCAGGATG GAAAGAGTGG 660
GACTTTAACA GATGTTCTTT TACAAGGATT CCCTGGCTCT ATTTAATCAA GATTGTCGAA 720
TATTGATTTA ATCTCCAGGC CCAACAGATG CGGTCTTAGC AGGTTTCAGT GGCAATTAGC 780
TGGGATCAGT TTGCAGGTCA GGCTCCGTGC TGGCAAGACA CTGTCTTCTA AAGGAGGCTT 840
GGCCTGGCCA CAGGAGTGAG CCCTGGAGGA GGGCGCGTAC TAAGTATTTA ACCATCAGTC 900
TAGCCCGGGC AGTGGCCCAC GGGAGCAGGC CCGCAGGCTG GGTCATAGCA 950
|
