EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-11000

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr19:36360160-36360560

Target genes

Number: 20
Name	Ensembl ID

TMEM147	ENSG00000105677
ETV2	ENSG00000105672
COX6B1	ENSG00000126267
PSENEN	ENSG00000205155
C19orf55	ENSG00000167595
ARHGAP33	ENSG00000004777
NPHS1	ENSG00000161270
KIRREL2	ENSG00000126259
APLP1	ENSG00000105290
AD000864.1	ENSG00000243968
NFKBID	ENSG00000167604
HCST	ENSG00000126264
TYROBP	ENSG00000011600
C19orf46	ENSG00000181392
CLIP3	ENSG00000105270
THAP8	ENSG00000161277
WDR62	ENSG00000075702
TBCB	ENSG00000105254
POLR2I	ENSG00000105258
ZNF146	ENSG00000167635

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RFX1	MA0509.2	chr19:36360367-36360383	GGTCGCCATAGCAACG	-	6.53
RFX1	MA0509.2	chr19:36360367-36360383	GGTCGCCATAGCAACG	+	6.54
RFX2	MA0600.2	chr19:36360367-36360383	GGTCGCCATAGCAACG	+	6.8
RFX2	MA0600.2	chr19:36360367-36360383	GGTCGCCATAGCAACG	-	6.96
RFX5	MA0510.2	chr19:36360367-36360383	GGTCGCCATAGCAACG	+	6.7
RFX5	MA0510.2	chr19:36360367-36360383	GGTCGCCATAGCAACG	-	6.96

Enhancer Sequence

GGCCCCTGAA GCCAGGCCTT GTCAGCTTTG CATCCTGCAA CGGGAGCCTG AGCAAGGGAT 60
GGAGGGAGGA GGGGCCAGAA CTCCTGGGTT CTGGCCTCCT CCTCCGCGAT TCAGGTTTAA 120
CCCCTTCGGG CTCCAGAGCG GCTGCGCTGG GGTGGGGGCG GAGTCTGTCT CCGCGGCAAC 180
AAGGCAGAAA GAATCCCGGG GGACCCAGGT CGCCATAGCA ACGGGAGCGC TGGGGCGCCC 240
CCGCCCTACG GGAGCTGTTT CCCAGGGAAC GGTGCCTCCA TGGAGGCGGT GTGCGGTGCT 300
TGGGGGAGGG GGCTGGTGCT GGGGGTCTCG GTCCTAGGGA GCAAAGAACC AGGGGACCCT 360
CATGCCAACG CCCCCCGAGC CCTCACTGTC CTTTCCACTT 400