EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-10994

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr19:36049010-36049260

Target genes

Number: 21
Name	Ensembl ID

DMKN	ENSG00000161249
GAPDHS	ENSG00000105679
AD000090.2	ENSG00000236144
TMEM147	ENSG00000105677
ATP4A	ENSG00000105675
ETV2	ENSG00000105672
COX6B1	ENSG00000126267
UPK1A	ENSG00000105668
AD000671.1	ENSG00000239352
AC002314.3	ENSG00000241762
ZBTB32	ENSG00000011590
MLL4	ENSG00000105663
IGFLR1	ENSG00000126246
U2AF1L4	ENSG00000161265
PSENEN	ENSG00000205155
LIN37	ENSG00000188223
C19orf55	ENSG00000167595
ARHGAP33	ENSG00000004777
KIRREL2	ENSG00000126259
APLP1	ENSG00000105290
LRFN3	ENSG00000126243

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr19:36049209-36049219	GGGGCGGGGC	-	6.02
Klf1	MA0493.1	chr19:36049197-36049208	TGGGTGTGGCC	-	6.62
SP1	MA0079.4	chr19:36049083-36049098	GGTGGGCGGGGCCTT	-	6.45
SP2	MA0516.2	chr19:36049065-36049082	CTGTGGGCGGGGCTGGG	-	6.04
SP3	MA0746.2	chr19:36049083-36049096	GGTGGGCGGGGCC	-	6.14
SP4	MA0685.1	chr19:36049081-36049098	GTGGTGGGCGGGGCCTT	-	6.1

Enhancer Sequence

GGGGGCGGAT TTGGAGAGCG AGGTGCTCCC CATGGACAGT CCCGCCGAGG AGAAGCTGTG 60
GGCGGGGCTG GGTGGTGGGC GGGGCCTTGC CTCTGGTGGA CGGGGCCATA GGCGGAGCGG 120
GAGATGGGGT GGGGTTTGGC TGCGGAGAGA AGGGGCAAGG AGCGAAGCCC CTCGTGGCCC 180
GCTGATGTGG GTGTGGCCTG GGGCGGGGCC CGAGGTGGGC GGGCCCAGGC CGTGGGCGGG 240
GCCGGCTGCG 250