Tag | Content |
---|
EnhancerAtlas ID | HS177-10886 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr19:19599860-19600500 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MITF | MA0620.2 | chr19:19600216-19600234 | AAGGGTCATGTGACCAAG | + | 6.19 | MITF | MA0620.2 | chr19:19600216-19600234 | AAGGGTCATGTGACCAAG | - | 6.19 |
|
| Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
SE_01191 | chr19:19597419-19601481 | Adrenal_Gland | SE_09215 | chr19:19595450-19601494 | CD14 | SE_11973 | chr19:19597794-19601624 | CD3 | SE_13867 | chr19:19597292-19601474 | CD34_Primary_RO01536 | SE_14578 | chr19:19595555-19601818 | CD4_Memory_Primary_7pool | SE_17284 | chr19:19597785-19601599 | CD4p_CD225int_CD127p_Tmem | SE_17695 | chr19:19595455-19601775 | CD4p_CD25-_CD45RAp_Naive | SE_18023 | chr19:19597051-19602095 | CD4p_CD25-_CD45ROp_Memory | SE_18475 | chr19:19595670-19601884 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19438 | chr19:19598715-19601649 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20088 | chr19:19597646-19601744 | CD56 | SE_22348 | chr19:19595603-19601745 | CD8_primiary | SE_24291 | chr19:19597429-19601354 | Colon_Crypt_2 | SE_29832 | chr19:19598800-19601612 | Fetal_Muscle | SE_31176 | chr19:19598232-19601563 | Fetal_Thymus | SE_32371 | chr19:19599909-19601478 | Gastric | SE_37262 | chr19:19598596-19601447 | HSMMtube | SE_41770 | chr19:19596688-19599943 | LNCaP | SE_41770 | chr19:19599953-19601445 | LNCaP | SE_42846 | chr19:19598281-19601556 | Lung | SE_50636 | chr19:19598249-19601453 | Sigmoid_Colon | SE_53638 | chr19:19595818-19601579 | Spleen | SE_55298 | chr19:19598271-19601370 | Thymus | SE_69075 | chr19:19598313-19601571 | H9 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I019484 | chr19 | 19595616 | 19601954 |
|
Enhancer Sequence | CATGCTCTTT TTCCTGAATT AAAGATCTCT TTTAGAAAGT ACTGAGACTC TTAAAGCCTC 60 TCTCCTTTAA AAAGTGAGCT TAACAAAGTT TTTCATTTTA GAAACTTAGA GGGGCCAGTG 120 ACCCTGCTGT GTGCGGTGTA TGTAGAGGTG ACTGGAGCCT GTGGTGCAGC AACAGTCCCC 180 TGTGGGCTGG CGCCACACAG GAAGTGCCTG CAGCTCCACA GCCCTGGGGT GAGCCTGGCG 240 CCTCCATTTT CTGACAGTAC CTGAACCTTT ACCTCCCTTC TCAAAATGAA GGCTGCGTGT 300 CACAAACCGG TTGGAACTGG CCGTTGCCAT GGTTTTCACG TTGGAAGGCA CAGTTAAAGG 360 GTCATGTGAC CAAGGAGGGA AATGCCTTTG TCACATGACT TTTTGGTGGC CTGATTAGCA 420 TACAGGAAGT TCACTCCCTG CTGGCTGCTG GGATGCTGAG TGATCATTGA TGGGTGGTGA 480 CATCATCTCT TGGATGAGTT ATTGATTAGT CGCAGGCCAA GATGGGGCCA GGGAGCGCTG 540 TGGGCAGAGC AGCCCTCTCA GGCAGCTTCA GCTGCTAGGT GGTCTGGACC CCTCGCCTAC 600 CCTCTTCCTT CAGGCAGGTT TGAATTTTAT TAGACATCTC 640
|