Tag | Content |
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EnhancerAtlas ID | HS177-10855 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr19:18132270-18133440 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | + | 6.44 | MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | - | 6.44 | RREB1 | MA0073.1 | chr19:18132340-18132360 | CACCCCCCCACCCCCCACCT | + | 6.22 |
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| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_03528 | chr19:18131311-18133631 | Brain_Angular_Gyrus | SE_04156 | chr19:18130327-18135495 | Brain_Anterior_Caudate | SE_05027 | chr19:18129368-18135719 | Brain_Cingulate_Gyrus | SE_05917 | chr19:18129420-18135750 | Brain_Hippocampus_Middle | SE_07191 | chr19:18123490-18135726 | Brain_Hippocampus_Middle_150 | SE_08048 | chr19:18129556-18135507 | Brain_Inferior_Temporal_Lobe | SE_11531 | chr19:18130225-18136150 | CD20 | SE_17546 | chr19:18130687-18135928 | CD4p_CD25-_CD45RAp_Naive | SE_32095 | chr19:18130664-18133651 | Gastric | SE_33722 | chr19:18132360-18135625 | H2171 | SE_41200 | chr19:18130424-18135677 | Left_Ventricle | SE_42935 | chr19:18130491-18135643 | Lung | SE_48098 | chr19:18117499-18135641 | Psoas_Muscle | SE_48877 | chr19:18130441-18133652 | Right_Atrium | SE_50498 | chr19:18130482-18133715 | Sigmoid_Colon | SE_51440 | chr19:18125584-18135837 | Skeletal_Muscle | SE_55387 | chr19:18131327-18132959 | Thymus | SE_55387 | chr19:18132966-18133608 | Thymus | SE_61722 | chr19:18124231-18170119 | Toledo | SE_65475 | chr19:18130282-18133763 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018019 | chr19 | 18130584 | 18136229 |
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Enhancer Sequence | CCCACGCCAG GGTATGCACA AACCTATCCA AACACACGCG TGTCTGCCCT AGCTTCCCTC 60 ACCCGGGAGT CACCCCCCCA CCCCCCACCT TGTTTTTGAT GTTCAGGAAA GTCCCCAGAA 120 AGCACTGGGC CCGGGCAAGG GGCCAGGAGG AAATGGTGAC TCAGCCGGTG GCCATCAGTG 180 CCTGCCACGC TGGGCTGGGT GGACTGCGCG GCCCGATCTG GGAGGATCCA CAGAAAACAA 240 CAATAAAAGA TGAGGGCGTG GGTGCGGGGT AAAAAGGACT CAGCCCAAGA ATGATCAGAG 300 AGGGGATGGA TCCCCCTGTG CTCCAACACT TCAACCCTGC TGGGCCTGAT TGACAAGTGG 360 GGAAACTGAG ACACAGGGAA CAAGTGACTT CGCCAAGGCC CACCAGCCAA GATGGTACAG 420 GCAAGGGGAT CCCTAAGTCC TTAACACAGG GGTCTGGAGG AATGTCTACC TGCCCTGCCC 480 TTTTTTTTTT TTTTTTTTTT GGAGACAGGG TCTCACTCTG TCCGTCAGGC TGGAATGCAG 540 TGGCATGATC TCAGCTGACT GCAATCTCCG CCTCCTGCCT CAGCCTCCCA AGTAGCTGGG 600 ATTACCGGCG CCTGTCCCTA TGCCCAGGTA ATTTTTGTAT TTTTAGTAGA GATGGGGTTT 660 CACCATGTTG GCCAGGCTGG TCTCAAACTC CTGACCTCAG GTGATCTGCC CACCTCGGCC 720 TGCCAAAGTG CTGGGATTAC AGGCGTGAGC CACAGTGCCC GGCTCCCTGC CCCACTTTCT 780 GAGACCCAGA TCCACTTCCT GGTTTCCTGT GTGGTCATGT GACCACACTT GGCCAATTGG 840 AGCCTTTTGT TATCACAGGC ACAGGGATTG GGTCAGGGCT GGGCACGTGA TCCTGCCTGA 900 GCCAATCATG CTACGAGTTT GGAGACTCCC TGGAAGAAGG CCTAGAAGTA AGGAAAACCA 960 TCTTGGACGC ATGATGATGG CAGTGGATCA GAGTCCCAAG GACACTGGTG AAGATCAGAG 1020 CAGGACTCAC ACAACCTCAG ATCCCTGTGG AGTCAGGGTG GAACCAGAGG GAAGGCTGAA 1080 GGCTGGAGGG TCCTGAGAGG CCTTGCAGAA AGAGAGGACA TTGGAGCTGG GGCTTTGATG 1140 GATGAAGAGG AACTAGGGAA AGGCATTTCA 1170
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