| Tag | Content |
|---|
EnhancerAtlas ID | HS177-10827 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr19:15947550-15948300 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| SOX10 | MA0442.2 | chr19:15947861-15947872 | AAAACAAAGAA | + | 6.62 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_15306 | chr19:15938045-15950784 | CD4_Memory_Primary_7pool | | SE_25284 | chr19:15946731-15948254 | Colon_Crypt_3 | | SE_34460 | chr19:15937465-15948384 | HCT-116 | | SE_34818 | chr19:15937060-15948777 | HeLa | | SE_39742 | chr19:15946667-15947764 | Jurkat | | SE_40367 | chr19:15946289-15948458 | K562 | | SE_57685 | chr19:15946665-15948118 | VACO_503 | | SE_66853 | chr19:15946667-15947764 | Jurkat |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | CTCCCGGAGT CCCAGCTGCC GGCCCAGCCC CACCCTGCGG CCGAGAGGAC CGAGGGCCGA 60
GCTGCTCCAG GGGAACTCGG GTCCCAGACC CCGGAGTCGC AGCGGACAGG CCCGGGTCCC 120
GCCACAGCCA GATCCGGCTG GTTCCACCAG CTCCTCCTCC GGTCTCGGGA CGTCCGGCCC 180
CGCACACTCA GCATTTCCGG CTTCCGGGTG TCCCGGCGTC CTCCCCTGGG CCTGCTCACG 240
TCGCAGAGGG GCGGCGACGG GGATTAGAGG GGAGGAGGGC CTGCGCGAGC AGCAAAGACC 300
CCAAACCCCA AAAAACAAAG AAACCGCCAG AAACTGAAGC TTCCACAGCC CGCCACGTCC 360
CCCGGCTACG GCTACGCTCC TGATTGGATA GTTAGTACGG CCCCTAGTGC CCCTGATTGG 420
ATACCGCTTC AGGTCCCGCC CCCTGGGGTT AGAAAGACAG GAGACCCGAG AAGACACTTG 480
GCTGCGTGGA GCCCAAATGG GCGGTTCCTG GCAACTGGGC TTGTTGTCTT CCTCGTGTCA 540
GGATGTAAAA AGAAAAGTAG AGGTTCTTCT TCAAAGACTT CCTTCTTCAT CTAATTAAGA 600
ATAAATAGTG TTTGAAATGC TTGGTTTTTG GTGCCATAAA GAAATAGCAC TTTAACATTA 660
ATTTATTTAG CAAGGCCATT TTTACTCCCT GCAGAAAGGG TACACTCGCC AGCAGTTTTG 720
CCACGAGCGT ACACCGAGCA AAGGAGACAG 750
|
