Tag | Content |
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EnhancerAtlas ID | HS177-10795 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr19:13273480-13275890 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
KLF13 | MA0657.1 | chr19:13273958-13273976 | GGGCCACGCCCCCTTTCC | + | 6.7 | KLF14 | MA0740.1 | chr19:13273959-13273973 | GGCCACGCCCCCTT | + | 8.42 | KLF16 | MA0741.1 | chr19:13273960-13273971 | GCCACGCCCCC | + | 6.62 | Klf12 | MA0742.1 | chr19:13273959-13273974 | GGCCACGCCCCCTTT | + | 6.28 | SP1 | MA0079.4 | chr19:13273957-13273972 | CGGGCCACGCCCCCT | + | 6.01 | SP3 | MA0746.2 | chr19:13273959-13273972 | GGCCACGCCCCCT | + | 6.82 | SP4 | MA0685.1 | chr19:13273957-13273974 | CGGGCCACGCCCCCTTT | + | 6.68 | SP8 | MA0747.1 | chr19:13273960-13273972 | GCCACGCCCCCT | + | 6.92 |
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| Number of super-enhancer constituents: 80 | ID | Coordinate | Tissue/cell |
SE_00539 | chr19:13272838-13277005 | Adipose_Nuclei | SE_00809 | chr19:13274306-13274748 | Adipose_Tissue | SE_00965 | chr19:13273230-13276219 | Adrenal_Gland | SE_01884 | chr19:13273272-13276495 | Aorta | SE_02410 | chr19:13273115-13276563 | Astrocytes | SE_02943 | chr19:13273247-13276283 | Bladder | SE_04421 | chr19:13272986-13276406 | Brain_Anterior_Caudate | SE_06231 | chr19:13272976-13276921 | Brain_Hippocampus_Middle | SE_07309 | chr19:13273010-13276611 | Brain_Hippocampus_Middle_150 | SE_08538 | chr19:13273131-13276518 | Brain_Inferior_Temporal_Lobe | SE_09569 | chr19:13272934-13276409 | CD14 | SE_10284 | chr19:13272476-13276735 | CD19_Primary | SE_11152 | chr19:13260138-13284995 | CD20 | SE_12008 | chr19:13272973-13276424 | CD3 | SE_13260 | chr19:13275091-13275811 | CD34_Primary_RO01480 | SE_13717 | chr19:13273092-13276618 | CD34_Primary_RO01536 | SE_14456 | chr19:13272656-13276599 | CD4_Memory_Primary_7pool | SE_15461 | chr19:13272885-13275850 | CD4_Memory_Primary_8pool | SE_15914 | chr19:13272942-13274410 | CD4_Naive_Primary_7pool | SE_15914 | chr19:13274696-13276414 | CD4_Naive_Primary_7pool | SE_16444 | chr19:13272749-13276117 | CD4_Naive_Primary_8pool | SE_16902 | chr19:13272921-13276228 | CD4p_CD225int_CD127p_Tmem | SE_17360 | chr19:13270598-13276927 | CD4p_CD25-_CD45RAp_Naive | SE_17844 | chr19:13272515-13276870 | CD4p_CD25-_CD45ROp_Memory | SE_20072 | chr19:13272484-13276702 | CD56 | SE_20795 | chr19:13272889-13276553 | CD8_Memory_7pool | SE_21526 | chr19:13272945-13274823 | CD8_Naive_7pool | SE_22040 | chr19:13272919-13276576 | CD8_Naive_8pool | SE_22453 | chr19:13272766-13276693 | CD8_primiary | SE_23096 | chr19:13272751-13276502 | Colon_Crypt_1 | SE_23766 | chr19:13273074-13276318 | Colon_Crypt_2 | SE_24716 | chr19:13273141-13276251 | Colon_Crypt_3 | SE_25952 | chr19:13272861-13276782 | Duodenum_Smooth_Muscle | SE_26584 | chr19:13272607-13276846 | Esophagus | SE_27635 | chr19:13272489-13281569 | Fetal_Intestine | SE_28568 | chr19:13272401-13281569 | Fetal_Intestine_Large | SE_29636 | chr19:13272951-13276577 | Fetal_Muscle | SE_31149 | chr19:13273001-13276614 | Fetal_Thymus | SE_31408 | chr19:13272136-13277461 | Gastric | SE_32780 | chr19:13273287-13275484 | H1 | SE_32780 | chr19:13275529-13276574 | H1 | SE_34050 | chr19:13272939-13277307 | HCC1954 | SE_34500 | chr19:13272745-13281640 | HCT-116 | SE_34633 | chr19:13271191-13281627 | HeLa | SE_36380 | chr19:13273191-13276536 | HMEC | SE_37565 | chr19:13273392-13276032 | HSMMtube | SE_38051 | chr19:13272931-13280418 | HUVEC | SE_39215 | chr19:13273157-13276721 | IMR90 | SE_40104 | chr19:13273262-13276388 | K562 | SE_40852 | chr19:13272994-13276753 | Left_Ventricle | SE_41693 | chr19:13273306-13276145 | LNCaP | SE_44417 | chr19:13273127-13276411 | NHDF-Ad | SE_44845 | chr19:13273133-13276636 | NHLF | SE_47439 | chr19:13272634-13281546 | Panc1 | SE_47495 | chr19:13273233-13276204 | Pancreas | SE_48450 | chr19:13272917-13276448 | Psoas_Muscle | SE_48836 | chr19:13273028-13276636 | Right_Atrium | SE_49692 | chr19:13273916-13276150 | Right_Ventricle | SE_50086 | chr19:13272766-13277385 | Sigmoid_Colon | SE_51384 | chr19:13273052-13276750 | Skeletal_Muscle | SE_52361 | chr19:13271922-13281551 | Small_Intestine | SE_53312 | chr19:13272871-13276631 | Spleen | SE_54883 | chr19:13272938-13276492 | Stomach_Smooth_Muscle | SE_55159 | chr19:13273233-13276560 | Thymus | SE_56946 | chr19:13273886-13276505 | VACO_400 | SE_57396 | chr19:13273697-13276492 | VACO_503 | SE_57920 | chr19:13273914-13276402 | VACO_9m | SE_60135 | chr19:13260128-13279366 | Ly4 | SE_62354 | chr19:13259874-13293454 | Tonsil | SE_64811 | chr19:13273192-13276593 | NHEK | SE_65341 | chr19:13272919-13276239 | Pancreatic_islets | SE_66624 | chr19:13273268-13273900 | Jurkat | SE_66624 | chr19:13274003-13274767 | Jurkat | SE_66624 | chr19:13275022-13276422 | Jurkat | SE_67827 | chr19:13273032-13276700 | u87 | SE_68590 | chr19:13260276-13279271 | TC71 | SE_68591 | chr19:13260276-13279271 | TC71 | SE_68592 | chr19:13260276-13279271 | TC71 | SE_68593 | chr19:13260276-13279271 | TC71 | SE_68683 | chr19:13273233-13277405 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 13274586 | 13275096 | chr19 | 13273540 | 13274187 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I013160 | chr19 | 13271200 | 13285018 |
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Enhancer Sequence | AGACAGCAAG TAAAGGACAG CTCTAGTCGG GTCCTCTATC CCGAAGCCTC CTCCCCACTC 60 TGCCCTGCCC TGCCGTGCAG GACCCAAAGG AAGGGCGCCC CAGTTCAGCC TCTGTAGATC 120 TGGGAAAGGG CCGGGCCACA GGTCGGGACC AATCCAGAAG CAGCACCCAG ACCGGTTTAC 180 CCGGTTCCAG GACCTTGGGC GAAGTCCACC CGCCCGAGGG CAGGGACGAC GCAGGCCACG 240 CCGCGGCCCA GTTGCTAGCC AGGCAGGGTG GGGATTTGAT CTTGCCAAGG AAATGTGAGC 300 GGGAGGCCGA GCGTTGGAGG TGGGTAAGTC GTCACTATGC AGGGCGGAGC CATCCTGTGT 360 CTATCACGCC CAAGGGCGGT GCATGCAAAT TGACTCCCGC ATTTGGCTTT TCCCCGGGCT 420 CCGTCTCCGC GCGCTGCAAC CCGCGACTTC CAAGAACTCC CCGCGTAGTC AGCTGCCCGG 480 GCCACGCCCC CTTTCCGGAC CCGCCCTGCC CGCCCCAGGG AGGCGGGGGC GGAGCTTGCG 540 GCCCAGCGGG AAGGCGGAGG CGGGGGTCGC GCCCAGGTCC CGGGGGCGTC AGAGGCAATG 600 GGAAGTCGTG GCTTCTGCAC CGCCCTTGGG GGTTCGGCTC CCAATCAGGG AAAAAGGGCC 660 GAGAGAATGA AAGAGTAATG AGACTTGCGA GTTTGAGGCT CACACTACTC TCTTTGGGTT 720 GGGGGTTGCT GAAGCCTCCA CGTGTATTCA GGGAGCCCCG AACCTCACAC CTCTGTCCAG 780 GGGAGCTCAG AACCCGCCGT GTTCTGGAAA GCCTACACCT TCCCCGGTTT TTTAGTGTCT 840 AGGGGAGCCC ACAACCCTCA CAGCCGTGTC TAGTAGCGCT CAGATCCACA CACCTGTGTT 900 TGGGGGAGCC CAGATCTTCT CTACCTGTGT CCAGATGAGT TCAGAGCCCC GACGTTTGTC 960 CAGGAAAGCC CACCTCTGTC CAGAAGCGCT CTGACCAGGA CCTTTCCTGT TTCCTGAGGC 1020 TCAGCCTAGG GGGTCATCCC ACCCAGGTCT GTGTTAAGGG GAGCTTGTGT CTCCCCAAAC 1080 ATGTCCAAGT GAGCTGAGCT CAGGAGCTGA GGCCTCCCCA TATCGTGCTC CCCGCCTGGC 1140 CCTTTGGTGA ATCCCTTTCT CAGAAGAAAC CCTCAGGGGC CCTAGCCCTG CTGCCCTTCC 1200 CTGCACTGTC TTCGAGCCTC CTGGCCCAAT TGGCCCCTCC CCCAGTACAC TGTTGAGTCT 1260 TAGTTAAGAC ATAATCCCAG CATTCACTGT CCCCCATCCC CCAGCTCTCC CGCACCTCGG 1320 CGGCTGGCCG GGCCCCCGGG AGTGCCGTCA TCCCAGCCGG CTGGCCACCC GACTGGCACC 1380 AATTAATTTC CTCCTCGGCC TGTCCACCCA GGGCCTCGGC CTGTCTGGTT GCCAGCTGCT 1440 CACCCTCAGC CAGCCCGCCC CCTCGGGCTC CCAGGGAATT GCCAACAGTT CTCCTCCTTC 1500 CTGCAACCCC CCCACCCCCA ATCCAGGCCA CCCCACCCAG CACAGTTAAT CAGAAAAAGC 1560 TGACAGTTAG GACCTGGAGG AGTGATCTGA AATCAGATGG AGGAGGGGTG GGATGTTAAA 1620 CTTTCGGACC CAGGGATGCT TGGGGTGGAG CGGGGGCATG GCTGGAGGGA GGCAGAGGAT 1680 CCAGTTTTAC TTAAGAACCC CAAATCAAAG GCTTGTAGCT TCCAGATGGG GACTGCAGGG 1740 AGGGCTGACC CCCTCCCGCA TACACCAGGC GGGCAAGGTG GAGCGCCCCT CCTCGGAAAT 1800 TGCCCCCCGC CCAAGATGCG TCAGTGACAG CTGTGCCTCC TCAGCCCGCA CCCAGCCGGT 1860 TTCCTTTTCC TGTGCACACT CTCCCGATGG GCTGGCCTTC AGCCTGGAGA GACTCCACGG 1920 CCCCTTGGAA GGGGCTCCCC AGAGGGTCTT CCTGGACGAG GGGGAGGGGA CAGGCTGAAG 1980 AACAATGGGG CTTCTGTGGC TGCAGGACGC CAGGCACTTC CTGTTAACCC TTTCCTCGGG 2040 GTGCAGCTGC AGGGAGCACC TCCCAGGTCC CGCCTTGTGG GAAGGGGCAG AGGCAGCCTG 2100 AGGGGAAATC TTGTTGCGGG AATTAACTGT TGTGTTAATT GAGGCTTTTG TGAGTGTACT 2160 TAGGAGGGGT GAGGTGAATC ACACCTTTTC TCACTTGATG GAGTTACAGG GCTTTCTCCT 2220 CTATTGCTGA GGGCTGTGCA GTCAGGGACG GGGCAGGGCT AGCCTGGGAG AAGCCTGTGC 2280 ACTGAGCTCA GAGACGTTCA AGGCTTTTCC CCAGATAGGT TACACCAGGA TCTCCAGGGC 2340 ATGGACAGGG ATGGGGTCGG GGAACCCAGG CATCCTAGGT GAATCCAAGG AACAGCCATG 2400 TCTGCAAACC 2410
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