EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-10694

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr19:5308440-5309390

Target genes

Number: 7
Name	Ensembl ID

AC005790.2	ENSG00000239524
PTPRS	ENSG00000105426
SNRPEP4	ENSG00000233270
SAFB2	ENSG00000130254
SAFB	ENSG00000160633
RPL36	ENSG00000130255
LONP1	ENSG00000196365

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF143	MA0088.2	chr19:5308826-5308842	TACCCACAATGCCTGG	+	6.15
ZNF263	MA0528.1	chr19:5309152-5309173	AGAGAAGGGAGGAAGGGGGGG	+	6.33

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I005308

chr19

5308365

5310010

Enhancer Sequence

CCCAGCATGG GGCCAAGCAA ACAGCTGAAG CCCAGTACAT CCACACGGAA GAGAGGGAAT 60
CAGGCCCAGG GCAGCAGCCA CAGTGCAAGG CCTGGGCTAG TTGTGGCTGG TGGTGAGCAT 120
CGAGTGCCAA GCCAAGCTTC ACCGACGCAG TCACAGGGGC AGACTCCATG CGGCAGAGGT 180
GGCTGCCAGC CCCTCGGGGA ACCTGCAGAC TCACGTTCAG CAGTGGGGGA AGAGAGCAGG 240
GTGGGCAGGG ACCTGGCAGC CTTGGGGGTA GGGGAACTGT GGGCTCCAGG CGGGGAGAGA 300
GATTATATAT TCATCAGAAT CTTAAACAAA AGCCCCGCAG CCGCCTGTCA GCCAGGCTAT 360
GGCTTTTATG GTAATCAGCA ATGAATTACC CACAATGCCT GGCCAAGCGC AAGTGGTTCT 420
TGGCCCGGAT CCTAAACTAA TTTTTGTATG TTCGTGTGTA TATAATTTTG CTCGCTCCCT 480
CCCGTTCCTC TCCCTTCATT ACCAGGAGCA CGGGTGGGGT ACGGGGCAGG GAGGCAAAAG 540
GAACCCTGGG TGTAGAAGTG GAGGATGCTC ACCAAGACCC CCTGGCCCTA CAGCCTGCCT 600
GGCACTAGGC CCTGGGCTCA GAGTGTGTGG AGGTGGGAGG TGAGTGCCAA GTGGGAACTG 660
AGGGGAGCCT GGAAACCACC AAAAACTGGA GCTGGCAGCT CCGGGGGTGG AGAGAGAAGG 720
GAGGAAGGGG GGGTTGGCTG GCTCTGGTGG TGAGCAGAGT GTGCAGGCCC CTTAGTGGGG 780
TTGAGCCTGT GCCACGTGCT GTGTGGCCTT GGGCAAGTGC CTTAACCTCT CTGGGCTTCA 840
GCCCCCTGGT CTGCAAATTA GACCTCCCTT CCTGTCCTAA CCTCTAGCCC CATCCAGCCC 900
CAAGTGTGTA GCCCACAGCC CCTCCCAGGG CCCTGTCTAT GCAGGCCACT 950