Tag | Content |
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EnhancerAtlas ID | HS177-10633 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr19:1855230-1855770 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr19:1855390-1855408 | GGAAGACAGGCAGGAAAG | + | 6.43 | KLF5 | MA0599.1 | chr19:1855444-1855454 | GGGGCGGGGC | - | 6.02 | SP1 | MA0079.4 | chr19:1855422-1855437 | AGGGGGCGGGGTCTC | - | 6.27 | SP4 | MA0685.1 | chr19:1855420-1855437 | GGAGGGGGCGGGGTCTC | - | 6.4 |
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| Number of super-enhancer constituents: 26 | ID | Coordinate | Tissue/cell |
SE_05653 | chr19:1854545-1857986 | Brain_Cingulate_Gyrus | SE_12493 | chr19:1855142-1855377 | CD34_adult | SE_12493 | chr19:1855582-1855832 | CD34_adult | SE_15325 | chr19:1851179-1863643 | CD4_Memory_Primary_7pool | SE_17066 | chr19:1855162-1858408 | CD4p_CD225int_CD127p_Tmem | SE_18006 | chr19:1854567-1858438 | CD4p_CD25-_CD45ROp_Memory | SE_20207 | chr19:1854775-1857036 | CD56 | SE_20804 | chr19:1851994-1859364 | CD8_Memory_7pool | SE_22514 | chr19:1854652-1858255 | CD8_primiary | SE_23274 | chr19:1855536-1863748 | Colon_Crypt_1 | SE_23831 | chr19:1855456-1863700 | Colon_Crypt_2 | SE_24756 | chr19:1851482-1865735 | Colon_Crypt_3 | SE_27152 | chr19:1853176-1865991 | Esophagus | SE_34338 | chr19:1852133-1866086 | HCT-116 | SE_41602 | chr19:1854125-1856964 | LNCaP | SE_45211 | chr19:1855501-1858228 | NHLF | SE_50407 | chr19:1852750-1865843 | Sigmoid_Colon | SE_52963 | chr19:1854521-1862878 | Small_Intestine | SE_53592 | chr19:1853107-1866012 | Spleen | SE_57652 | chr19:1855522-1856323 | VACO_503 | SE_61842 | chr19:1851542-1865663 | Toledo | SE_68584 | chr19:1847293-1885536 | TC71 | SE_68585 | chr19:1847293-1885536 | TC71 | SE_68586 | chr19:1847293-1885536 | TC71 | SE_68587 | chr19:1847293-1885536 | TC71 | SE_69023 | chr19:1852746-1858528 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | CCTCCTTTTC CAAATGACCA CCTGGGATGC AAAGGCTGGG TTAAGGGGGT ACAATCATGG 60 CAACCTCCCT AACCCTCCTG GCCCCTCCAC GAGCAAGGGG GCATGGGAGG AACCCGCAGG 120 CACAGTCAGT CTGGGCCCCG ATCTCGGGGT GTGGTTAGAT GGAAGACAGG CAGGAAAGCT 180 CACAGGGAGG GGAGGGGGCG GGGTCTCCCG GGAAGGGGCG GGGCCCGGCG GGCTGGACTC 240 GCCCCACCCC CACGGGACAG ATGGCGCTGG GCAGGGGCGG GCCACCACCC GGCCACTTCC 300 TCCACAGTCC CCTCCCACCG CCAAGGCCGG GCCTCGCCCA TCCTGCCCCT AACCAGCCGT 360 CACCATCTGG GCCTGCCTGT GCGCCTCCAG GCGGTGTGGG TCTTTGCTCT AGAACTGTGC 420 CACCCGACCC CTTCCTTTAG CCGGGGTCTC ACGCCCACAG CATGTGGCAT CGTGATGTCA 480 GCGTCTCCCC AGCAGATAGG GGTCTCCAAC GACTGGGGAG GGGCAGGTCA GTCCACCTCC 540
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