EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-10605

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr19:886990-887480

Target genes

Number: 17
Name	Ensembl ID

HCN2	ENSG00000099822
RNF126	ENSG00000070423
FSTL3	ENSG00000070404
PALM	ENSG00000099864
R3HDM4	ENSG00000198858
MED16	ENSG00000175221
PTBP1	ENSG00000011304
LPPR3	ENSG00000129951
CFD	ENSG00000197766
ELANE	ENSG00000197561
TPGS1	ENSG00000141933
CDC34	ENSG00000099804
BSG	ENSG00000172270
GRIN3B	ENSG00000116032
HMHA1	ENSG00000180448
POLR2E	ENSG00000099817
GPX4	ENSG00000167468

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr19:887443-887458	GATCTCAAGGTCAGG	+	6.34
RFX1	MA0509.2	chr19:887257-887273	GGTTGCCATGGCGACG	+	7.31
RFX1	MA0509.2	chr19:887257-887273	GGTTGCCATGGCGACG	-	7.31
RFX2	MA0600.2	chr19:887257-887273	GGTTGCCATGGCGACG	-	7.37
RFX2	MA0600.2	chr19:887257-887273	GGTTGCCATGGCGACG	+	7.62
RFX5	MA0510.2	chr19:887257-887273	GGTTGCCATGGCGACG	+	7.28
RFX5	MA0510.2	chr19:887257-887273	GGTTGCCATGGCGACG	-	7.28
Zfx	MA0146.2	chr19:887427-887441	GAGGCCGAGGCGGG	-	6.01

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1
Chromosome	Start	End

chr19

887120

887362

Enhancer Sequence

ATTGCTGGAA TCCAGGAGGT GGTGATTGCA GTGAGCCGAG ATCACACCAT TACACTCTGG 60
CCTGGGCAAC GAGAGCAAAA CTTTGTCTCA AAAACAAAAA AAAAAAGAAC AAGAAAAATG 120
TCTCTACGTT GTGAAAAAAT GCGAGGAAGA GAAGTGTATC ATACGTATCG TACGGCTCCA 180
TTCTAAGTTA CAAGTTAAAA AAAAACACTT CTTATAGCAA GAAGCAGGTC CAGAAGTCCA 240
GGAAGCAAGC CAGGCCTGGT GGTGAGGGGT TGCCATGGCG ACGACTCATC TGGTGTCCAC 300
ACCACACGTC TGTGTGGGTC GCAGGCTGGC ATGTCTGAGA CTATGTTAAA GGAGCACATG 360
TGCCTTTTAT TAATGTAATT AAAAAACAAA AATTTGGCCG GACGCGGTGG CTCACGCCTG 420
TAATCTCAGC ACTTTGGGAG GCCGAGGCGG GCAGATCTCA AGGTCAGGAG TTCGACACCA 480
TCCTGGCCAA 490