Tag | Content |
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EnhancerAtlas ID | HS177-10387 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr18:46458020-46459720 |
Target genes | |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
PHOX2A | MA0713.1 | chr18:46458957-46458968 | TAATTCAATTA | + | 6.14 | Phox2b | MA0681.1 | chr18:46458957-46458968 | TAATTCAATTA | + | 6.14 | ZBTB18 | MA0698.1 | chr18:46459295-46459308 | TTTCCAGATGTTT | + | 6.28 |
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| Number of super-enhancer constituents: 44 | ID | Coordinate | Tissue/cell |
SE_00297 | chr18:46453448-46463365 | Adipose_Nuclei | SE_01041 | chr18:46459044-46460317 | Adrenal_Gland | SE_01674 | chr18:46457621-46461046 | Aorta | SE_02345 | chr18:46457751-46460896 | Astrocytes | SE_02959 | chr18:46458698-46460174 | Bladder | SE_03502 | chr18:46458581-46460377 | Brain_Angular_Gyrus | SE_04121 | chr18:46458068-46463294 | Brain_Anterior_Caudate | SE_05251 | chr18:46453949-46463370 | Brain_Cingulate_Gyrus | SE_05955 | chr18:46446481-46480088 | Brain_Hippocampus_Middle | SE_07264 | chr18:46457869-46462563 | Brain_Hippocampus_Middle_150 | SE_08312 | chr18:46458017-46462377 | Brain_Inferior_Temporal_Lobe | SE_11810 | chr18:46458125-46462505 | CD20 | SE_23482 | chr18:46457659-46460241 | Colon_Crypt_1 | SE_24271 | chr18:46458440-46458674 | Colon_Crypt_2 | SE_24271 | chr18:46459179-46460300 | Colon_Crypt_2 | SE_25133 | chr18:46459371-46460641 | Colon_Crypt_3 | SE_26097 | chr18:46458359-46459987 | Duodenum_Smooth_Muscle | SE_26908 | chr18:46457922-46461057 | Esophagus | SE_27698 | chr18:46448262-46462356 | Fetal_Intestine | SE_28705 | chr18:46448500-46462248 | Fetal_Intestine_Large | SE_29974 | chr18:46458130-46462319 | Fetal_Muscle | SE_31550 | chr18:46457709-46461104 | Gastric | SE_36338 | chr18:46458673-46462143 | HMEC | SE_38707 | chr18:46454005-46462116 | HUVEC | SE_41124 | chr18:46457858-46462756 | Left_Ventricle | SE_42227 | chr18:46457684-46479968 | Lung | SE_43780 | chr18:46453091-46463232 | MM1S | SE_44360 | chr18:46458233-46461581 | NHDF-Ad | SE_45015 | chr18:46458374-46459652 | NHLF | SE_45645 | chr18:46452288-46478469 | Osteoblasts | SE_46741 | chr18:46459427-46460824 | Ovary | SE_47308 | chr18:46448347-46478259 | Panc1 | SE_48618 | chr18:46457650-46471726 | Right_Atrium | SE_50188 | chr18:46454783-46471671 | Sigmoid_Colon | SE_51514 | chr18:46458128-46463379 | Skeletal_Muscle | SE_52478 | chr18:46452303-46462338 | Small_Intestine | SE_53633 | chr18:46458273-46462345 | Spleen | SE_55015 | chr18:46458500-46462318 | Stomach_Smooth_Muscle | SE_59097 | chr18:46453600-46480091 | Ly3 | SE_62146 | chr18:46454581-46479860 | Toledo | SE_62532 | chr18:46448756-46483085 | Tonsil | SE_65410 | chr18:46457610-46462370 | Pancreatic_islets | SE_67202 | chr18:46453091-46463232 | MM1S | SE_68537 | chr18:46428073-46479503 | TC71 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr18 | 46458611 | 46458800 | chr18 | 46459367 | 46459671 |
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Enhancer Sequence | AAATCCAAGA GACAAAGATC ACAGATCACC GAAGGGACTT GGCAGCCAAG CCCAAGCCCT 60 TATTTTGCAG ATGAGAAAAC TGAGGCCCAG AACACAGAAA TGGCTCCTGC AAGGCCATGT 120 GGCCAGCCAG GGGCTGAGAC ACTCGGCCTC AACCCAGGAG AGCAGGCCAG CCTCTAGTGA 180 CAGGAAAGTG GAGGATGCTG GCCCCGACAT TGTAATTCTC TCCCAGCCCC CTCCTGGGAC 240 TAGGGCATCC TGGACACCCT GGGGGGAAGG TGGGGGGGCT TCTGAGTTTT TGCAGGCCCC 300 ACGATCCTGG GCTCTTCCCC AGAAAACAGC CCCCCCAGCA GGGTTTTGAT TGTGCCCCCA 360 CTGAGCAGGA GATGGGGCCC ATCTATTTGT AAGAACGGTA TGGTGCACTC AGATCACACT 420 GATAACTAAC TTTTTAATTT TCCCTCTTGG TTACTGATTC ATGAGGGGGT GGGGCAGGGC 480 TGGCTCAGAG GCTGCAGTGA GGCTGACAAG GTCCCCAGGC CCAGCTCTTG ATGATCCTCA 540 CTTAGCCTGC AGGGGAAGGA GACACTTAAC AGCTTCATGA GGTGACTGGA AGGTGGGACA 600 GGGGACAGGG ACAATCATTT AACCTCCGAG TGAGCCACCC CAGAAAATGC AGACAGCTAA 660 TCTGCCAACG GCACAGTCAT ATCTTGGCGT CTTATTGTTT TTGTTCCTGT TGAGTGACAG 720 TCGCAGATCA AAACGTAAGA AAGCAATACT GAAATGAGCA CACAGTCGCT GGCCTGGTTA 780 TCTGAGTTGT CTTCTGGCTG AAAGAAAGTC CCGACTTTGC AAGATGAAAT TGGAATTGAG 840 ACCAGATCTT CCCTTTCTGC TCTGATCAAA CCCCCCAGCA AAAGCAGCTC TCCCCGCCTT 900 TTCTTCCTGG TGGGGCTTCA CGGAGGAGCG AGAAGAGTAA TTCAATTAGT GAACTCCACA 960 GAGCTTGGAA GCCATCGGTT GGCCCCGGGG GAACAGACAG AGAAGGATGA ATGTGAAAAG 1020 GAAACACCCT GGTAACTGCA TCTTAGATTA TTTCATCCAA ACCCAACCCC AGACAGGCCA 1080 GGGCCTCACA CACAGGGCTG ACACCTCAGA AACGGGCTTA ACCCTCAGAT TTAAAATTAA 1140 AAAGCAAGAA TTTCCTTCAT CCCCCAGATG GTCTTCGTTG CGAATCAAGT CCTCTGGAGT 1200 TACAAAGGGA AAGTCACTCC TGGGCTTTGA AAACATCCCA CTTCTCCTCT GGCTGTCAAG 1260 ACATTAGATA CTGTCTTTCC AGATGTTTCC CCACCCCTTG GCCGTGGTCC ACTGAGGAGC 1320 CTGGCGCTAG GCTGGTCACT TCCACTCTGT GCTGTGCCCC AGGTACTACC AGGGTCTGGA 1380 GGGTGGATTA TAACCACAGC TCCTGTTCTT CCTGCTGTCA TCTTACAATC AGCAAGAAGC 1440 GGGGTGGGGA GGCGGGCTGG AACCAAAACC CGGGAGACCT ACCTCTGTTT ATCCACAAGC 1500 TTTGCTTTAT CTCAATTCTC AACAGACCAC ACAACCAAAG CAGAAGTAGA AGTGGATGAC 1560 TCAAGAGCTA GGCCCATCCC AGGGGGCCCA CCCTGCACCT CCCCCACCTA TGGCCTGGCT 1620 TCATGGAGGG ACCAGGCTCC TCTGTCCTAC AGAAGCTGCC CCTGCCTGCC TCCAGGTAGA 1680 GGCAACTCCT AGTCAATCCC 1700
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