Tag | Content |
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EnhancerAtlas ID | HS177-10326 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr18:42312800-42313940 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF1A | MA0046.2 | chr18:42313228-42313243 | AGTAAATAATTAATT | - | 6.47 | HNF1B | MA0153.2 | chr18:42313229-42313242 | GTAAATAATTAAT | + | 6.42 | Lhx3 | MA0135.1 | chr18:42313231-42313244 | AAATAATTAATTT | - | 6.78 |
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| Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
SE_10995 | chr18:42296569-42313011 | CD20 | SE_26019 | chr18:42311370-42314357 | Duodenum_Smooth_Muscle | SE_58983 | chr18:42279370-42342825 | Ly3 | SE_61046 | chr18:42288927-42388206 | HBL1 | SE_63146 | chr18:42288905-42342704 | Tonsil |
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| Number: 1 | ID | Chromosome | Start | End |
GH18I044729 | chr18 | 42309084 | 42314364 |
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Enhancer Sequence | GTGTGTAACT CAACACCTGT CCTTCTGCGG CAAACAGAGC TTACAGTGAT GGCTGAGCCC 60 CTCCTGCCCT GGCCCTACCG GCAGCTCGCA CCTTTCACTT AGGATTTCAA ACTCTCAAAA 120 ACCAGAGTCA GAGAATAAAT TCTCCCTCAG GATTCTGGTT TGGGCCAGGA AAAAAAAAAT 180 AATCAGAAAA ACAACTCCCA CAAGAAGTCC TGGGATCAGC ACAGCAATCT CTTTCTAGCT 240 CCAGACCTAG ATGAGGGAAG GTGTAGGGAT CTTAGAGACC TCTAAATCTC ACAAGTGGCT 300 CCCTCTGAAC CAGAGAGGGG CATGTGGTCT GAGTGATGTC CTCTTTTACT GTTTGAATGC 360 CAGCTCATCT GAGCTACACA ACACCCCCTG TTATTTCTGT CTGACATGGC CAAGCTGAAT 420 CTCTGGTAAG TAAATAATTA ATTTGGAAGT TGGGGATGTC AGTGGAAAAG TCGGCTCTGA 480 CGGCTCAAAT AACAAGCCCC AAATGTGATA GCCACTCTCT GGCCCTTTGA GAGACGACCT 540 GTCGGTTCTA TTAGATCTGG ACAGTCCTGT CTTCCGGCCT GTCTCTCCAC ATTAAAGTCA 600 AGGAACTGTA TCTCTCCATC TTTGGATCAC ATCTCTGTCC CCAAATGCTT GTGCACACTG 660 TGGAGTCTGG TGTTTTCTTT CCTAACTCCA CCAGGCCCAT GCAAGTCCAC ATGACTCATG 720 AGAAGAGATG AGTCGCAGCT CCAGTATCCC TGTGGGTTTG GGGAGGGGTC AGGCTGTGAA 780 TAAACCACTA CGTGGCTGAT TTTACATCCT TCTCTTTCAC CACAAAAACC TCAATTTCCC 840 TTTTTGTGGA AAACAAAAAC CCTCTTTCAG TGTTCCATCA AGGGGACTGT GGCCTTTGAA 900 TTGCACGGTG TCCCTGAGAA ATTTTAAAGA TTAATCAGCT TTTTTGGGGA GTGGCTGGGA 960 GAGGCCCTAT TCCTGTCCAT TAGGGAGTAG CAGGTCTCCC CTTCTGTTCC TTCTGACCAG 1020 GCTGCCATCT TCATGTGTAG ATGAGGAAAT TGATCAGCCT ATGAATGATT TGCAAATCCA 1080 CAGATGTGTG GCTGAGACCC TGAGGGCATT CATCACAGGA TCTGCCCGGT CCAAAAGTTC 1140
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