Tag | Content |
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EnhancerAtlas ID | HS177-10073 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr18:3623770-3624640 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Myog | MA0500.1 | chr18:3623995-3624006 | GACAGCTGCTG | + | 6.14 | Tcf12 | MA0521.1 | chr18:3623995-3624006 | GACAGCTGCTG | + | 6.02 |
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| Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
SE_02763 | chr18:3622267-3626272 | Astrocytes | SE_13339 | chr18:3621069-3626272 | CD34_Primary_RO01536 | SE_14380 | chr18:3620686-3627455 | CD4_Memory_Primary_7pool | SE_20735 | chr18:3621025-3626633 | CD8_Memory_7pool | SE_23414 | chr18:3623672-3625530 | Colon_Crypt_1 | SE_24111 | chr18:3623695-3624667 | Colon_Crypt_2 | SE_28047 | chr18:3623465-3625811 | Fetal_Intestine | SE_29024 | chr18:3623576-3625604 | Fetal_Intestine_Large | SE_29644 | chr18:3623207-3625384 | Fetal_Muscle | SE_31815 | chr18:3622925-3625600 | Gastric | SE_33785 | chr18:3622156-3626532 | HCC1954 | SE_34235 | chr18:3601188-3628195 | HCT-116 | SE_34627 | chr18:3620675-3627737 | HeLa | SE_36484 | chr18:3622231-3626476 | HMEC | SE_37649 | chr18:3621501-3626595 | HSMMtube | SE_39841 | chr18:3620699-3627829 | K562 | SE_44173 | chr18:3621676-3626130 | NHDF-Ad | SE_44760 | chr18:3621598-3626138 | NHLF | SE_46537 | chr18:3621539-3626487 | Osteoblasts | SE_47120 | chr18:3601015-3628781 | Panc1 | SE_50254 | chr18:3622960-3625633 | Sigmoid_Colon | SE_52285 | chr18:3621783-3625994 | Skeletal_Muscle_Myoblast | SE_52452 | chr18:3622290-3625714 | Small_Intestine | SE_56746 | chr18:3623021-3626737 | VACO_400 | SE_57446 | chr18:3623391-3624648 | VACO_503 | SE_64064 | chr18:3621712-3626001 | HSMM | SE_64950 | chr18:3622265-3626251 | NHEK | SE_67704 | chr18:3621437-3626982 | u87 | SE_68903 | chr18:3623657-3625587 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr18 | 3623872 | 3624258 | chr18 | 3624338 | 3624601 |
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| Number: 1 | ID | Chromosome | Start | End |
GH18I003615 | chr18 | 3615106 | 3627844 |
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Enhancer Sequence | GTCTCAAAAA AAAAAAAAAA AAAAAAGGAA AACCCCCCTA GAAAATGCTT TTCCCGTTGC 60 TTCCCTGCTA ATGGGCCTTT TTCATCAGGG CAGCCTCCAG CCTTAGGATG TGGCCGGTCC 120 CCGTGCGGAT GCCCGTTTCC CCTCCTGCCT GCATTCATCT GACCGGTTCA GTGGGATCTG 180 GTACTTTTCC TCCCTCCTCC TCGTGCTGGG CTTCCACATC ATCCAGACAG CTGCTGCCAC 240 ATTCCACCGC TCCAGCAGCG GAAGTAAGGC ACATTTAGGC CCTTTCTGGG TGAGTGACAG 300 CATTTGAGAT GAGATTAATC AAATGCCAGT GTTAGGGGAA AGCAGCCTTT CCCTGAGTCA 360 CCTCTGCTCC ACCTTTCTCA TGACACAGAG CATGAGCCTG TCCAACGGTT GGCCTGTGCG 420 TCAACCTCTG GCCAGGAGAC AACGGGCGCC TGTGACCTGG GCGTGAACCG TCTGTTTGTG 480 CGCATAGGTC TGACACTGCT GCTGGGCGAG CCTGCGTGCC CCTGCCCCGC GGTCCATTGA 540 CTGTGCCGCT GAGCACAGGC AGGGATGTGT GCCTGTCGCC CTGGGCCGCT GTCCCCTGAC 600 GGCAGATGAG ATATTCTTCC AGCTCAACAC TGATGTTGCA GGGTTTTTCC TCACCTACCG 660 CATGACGACT GAATGAAAGC ATTCCAGGAA ACCAAAAGGG CTGGGCAGGC CTCTGGAATT 720 TCAAAGCCGA CAGCCTGGCC CTGCTGGCAG CTCATTTCTG CCGCGTCATT TTCTCTGAAC 780 TGTAGGAGTA GTTTTGTAGC AAACTTATCA CCAAAATCCC ACAAATGTTA AGCATTACCC 840 TTCTTAGAAA GGAAAAGCCT ACTTACTTTT 870
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