Tag | Content |
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EnhancerAtlas ID | HS177-10072 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr18:3622020-3622900 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr18:3622800-3622821 | TTTTTCTTTTTCTTTTTTTTT | + | 6.09 |
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| Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
SE_02763 | chr18:3622267-3626272 | Astrocytes | SE_13339 | chr18:3621069-3626272 | CD34_Primary_RO01536 | SE_14380 | chr18:3620686-3627455 | CD4_Memory_Primary_7pool | SE_20735 | chr18:3621025-3626633 | CD8_Memory_7pool | SE_24111 | chr18:3622425-3622782 | Colon_Crypt_2 | SE_31815 | chr18:3622333-3622892 | Gastric | SE_33785 | chr18:3622156-3626532 | HCC1954 | SE_34235 | chr18:3601188-3628195 | HCT-116 | SE_34627 | chr18:3620675-3627737 | HeLa | SE_36484 | chr18:3622231-3626476 | HMEC | SE_37649 | chr18:3621501-3626595 | HSMMtube | SE_39841 | chr18:3620699-3627829 | K562 | SE_44173 | chr18:3621676-3626130 | NHDF-Ad | SE_44760 | chr18:3621598-3626138 | NHLF | SE_46537 | chr18:3621539-3626487 | Osteoblasts | SE_47120 | chr18:3601015-3628781 | Panc1 | SE_50254 | chr18:3622276-3622943 | Sigmoid_Colon | SE_52285 | chr18:3621783-3625994 | Skeletal_Muscle_Myoblast | SE_52452 | chr18:3622290-3625714 | Small_Intestine | SE_56746 | chr18:3621507-3622234 | VACO_400 | SE_56746 | chr18:3622323-3622807 | VACO_400 | SE_57446 | chr18:3622361-3622793 | VACO_503 | SE_64064 | chr18:3621712-3626001 | HSMM | SE_64950 | chr18:3622265-3626251 | NHEK | SE_67704 | chr18:3621437-3626982 | u87 |
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| Number: 1 | ID | Chromosome | Start | End |
GH18I003615 | chr18 | 3615106 | 3627844 |
|
Enhancer Sequence | GTACCTGTGG AGCCTCTGAT GTGCGTATGG GTAGTGTATG TGTATGTTGG CTGTGTGTGT 60 ACCCACTGAC TCTACAATTA AGCTGATTCT TTTTTTTTTT TGATATGGAG TCTCGCTCTG 120 TCGCCCAGGC TAGAGTGCAG TGACGTGATC TTGGCTCACT GCCAGCTCCG CCTCCCAGGT 180 TCATGCCATT CTCCTGCCTC AGCCTCCCAA GTAGCTGGGA CTACAGGCGC CCACCAACAC 240 GCCCGGCTAA TTTTTTGTAT TTTTTAGTAG AGACGGGGTT TCACTGTGTT AGCCAGGATG 300 GTCTCGATCT CCTGACCTCG TGATCTGCCT GCTTCATTCT CCCAAAGTGC TGGGATTACA 360 GGCATGAGCC ACTGCACTCG TCCTAAGCTG ATTATTTCAT GATTCATGCT TGGCTTGGGA 420 TCTGGGAATG ATGGGGAAAG TTACTCTCTC AAAGATTGGC TCTGTCCCCT GGGGAATGTG 480 GGAGGAGGGA GAGTCCAGAA TTCGGCTTCC AAGTGGCCAC AAGTCTGGCC TCCTTCACCC 540 AGCCTGTGCC TGTGTCCACA GGACAAGATC CAGGCTGACA GCCATGCACT GCCACACCAC 600 TGTCCCAGAC TGGGGCAAGC AGAAGGGGGC TGTTTCCTCT CATCTTTCCC CAATTTCTTG 660 CTTGCCAGAG GCAATCCTAA CTTGGCTAGC GGAAAGATAA TCACTTTTGA AAACATGAGT 720 GAGGTCAGCC CTTCCAGCCA CAGCCTGGAG TTTGAAATTA CACATTCATT GATTTCTTTT 780 TTTTTCTTTT TCTTTTTTTT TGAGATAGAG TCTCTCTCTG TCGCCCAGGC TGGAGTGCAG 840 TGGCACAATC TTGGCTCATT GCAACCTCCG CCTCCCAGGT 880
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