| Tag | Content |
|---|
EnhancerAtlas ID | HS177-09785 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr17:70423360-70424000 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| HOXA13 | MA0650.2 | chr17:70423709-70423720 | GTTTTATTGGG | - | 6.62 | | ZNF263 | MA0528.1 | chr17:70423419-70423440 | CTCTCTCTCCCTCTCTCCTCC | - | 7.02 |
|
| | Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
| SE_23138 | chr17:70423137-70424661 | Colon_Crypt_1 | | SE_23878 | chr17:70423245-70424513 | Colon_Crypt_2 | | SE_27674 | chr17:70421494-70427581 | Fetal_Intestine | | SE_28662 | chr17:70421678-70427515 | Fetal_Intestine_Large | | SE_34325 | chr17:70422979-70424585 | HCT-116 | | SE_47128 | chr17:70415398-70427150 | Panc1 | | SE_50247 | chr17:70423013-70424696 | Sigmoid_Colon | | SE_52735 | chr17:70423015-70424707 | Small_Intestine | | SE_56792 | chr17:70423754-70424478 | VACO_400 | | SE_59194 | chr17:70414908-70423425 | Ly3 | | SE_65456 | chr17:70423181-70424924 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I072425 | chr17 | 70421531 | 70427470 |
|
Enhancer Sequence | CCTGCACTCT GTACCCCTCA TGCCCTAACA GCATCAGAAC AGGAGGAAGG GGGCATTTGC 60
TCTCTCTCCC TCTCTCCTCC TACCCATTTT CCCCACTCCC TTTCTTTTCT TTTCTTTTTT 120
TTTTTTTTTT GCTGCTGGGC CTGCTATCTG CCATTATGAC CCCTGGTGGC TCTGCAGGCA 180
GCGGGGACAA CCCTCTCCCA GGCTTCATAC TAGTAGAGAT GATCTGTTGC TTAGTACTTA 240
CGACTGAGAC TTACACCCAG TGCTGTAACT GCTGTGGATG GTGGAATCTA GACAGCCCTG 300
GGCAAACCCA GCCCTTGCAG TAGGAGAGCG GCCCCTTGTT CCACATCCTG TTTTATTGGG 360
AGCAGACTTC AGTCGGCAGC ATGCCAGAAA GCCCTGATAT CCCATTTAAC CCCATGGACA 420
GTCTCTGCGC TCCTGAAGGC CAGCAGGTGC AATCCACCTG TTTATCTCCT GGACCCGCAG 480
GCTTTGAGTC ACCTGCTTCA TGTTCTCCCT GCAAACTGCG AGACCTCTGT GCCCTGCAGT 540
AGACTCGGCG TGTTCAGGGC AGGTAGCAGG AGCTGTTGCA TGGTGCCCCG GGGAGCTGGG 600
AAAATTCATG GTCACTCAAA ACAGCAATAG ATCCCAGCAA 640
|
