Tag | Content |
---|
EnhancerAtlas ID | HS177-09484 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr17:56468730-56469270 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr5a2 | MA0505.1 | chr17:56469249-56469264 | AGGGTCAAGGTCAGT | + | 6.28 |
|
| Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
SE_23473 | chr17:56468644-56469473 | Colon_Crypt_1 | SE_28098 | chr17:56467989-56469859 | Fetal_Intestine | SE_28995 | chr17:56467036-56469777 | Fetal_Intestine_Large | SE_34462 | chr17:56468008-56470683 | HCT-116 | SE_50030 | chr17:56465036-56470585 | RPMI-8402 | SE_52476 | chr17:56468328-56469588 | Small_Intestine | SE_56729 | chr17:56467057-56469075 | VACO_400 | SE_56729 | chr17:56469101-56469831 | VACO_400 | SE_57429 | chr17:56468222-56468962 | VACO_503 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I058389 | chr17 | 56467177 | 56469723 |
|
Enhancer Sequence | ATCAGCCAGG TGCAGAACAA AAGGAAATTA ACGATTTAGT TATTGCTCCA ATGCTGAAAG 60 TTTGAAAGTC AGTCATTTGG AGCAGGTTCC ATTGTGTGTC CCTGCATGTC TTGGGCTTTG 120 GTGGCTGTGC ACAGAGTACC ATGGCTCCAG TCACCACAGT GGGGGCCAAC GCTGGACGCC 180 CTGGCTTCTG AGCAAGAGAG ATGAAAGGCT TCTTCTAATG TAATAACTGA CGGCCTCTCA 240 GTGTCGTTTG AACTGTTTAC AGGCTGAGTT AACGATTACA GGCAATGTGT ATCTTGGCCA 300 GGTGCCCGAA ATTCTTACCC ACCCGTCAGA TATTATCAAA GAGCCCTTCC ATGCCTGGCT 360 GGAGTCCTTC CAAAGCACCT CATAGAGATG CCGACACAAA AGGAGGAGTG TTCAGAATGT 420 GCTCTCTGTC TCTCCAGAGG CCAAGCAAGA AAGTCAGAGG ATCAGCATGA ATTAGGTGCT 480 GGGGACACTG AGTTTCCAGG ACCACTCAGG ACTGGGGAGA GGGTCAAGGT CAGTACTGGG 540
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