Tag | Content |
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EnhancerAtlas ID | HS177-09262 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr17:43389200-43389780 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr17:43389690-43389711 | TGCTGGTTTCATTTTCATCTG | + | 6.11 |
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| Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
SE_01249 | chr17:43388149-43389866 | Adrenal_Gland | SE_04602 | chr17:43387681-43391078 | Brain_Anterior_Caudate | SE_11470 | chr17:43370585-43396257 | CD20 | SE_15206 | chr17:43388386-43397109 | CD4_Memory_Primary_7pool | SE_18500 | chr17:43387479-43397228 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19630 | chr17:43387582-43396207 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_23493 | chr17:43387582-43391120 | Colon_Crypt_1 | SE_24167 | chr17:43388391-43390604 | Colon_Crypt_2 | SE_25878 | chr17:43387248-43395764 | Duodenum_Smooth_Muscle | SE_26725 | chr17:43387623-43393334 | Esophagus | SE_30018 | chr17:43387566-43390933 | Fetal_Muscle | SE_31611 | chr17:43388205-43391255 | Gastric | SE_32589 | chr17:43387754-43395497 | GM12878 | SE_34075 | chr17:43387678-43390986 | HCC1954 | SE_40748 | chr17:43387552-43395549 | Left_Ventricle | SE_41691 | chr17:43388360-43389804 | LNCaP | SE_43331 | chr17:43387609-43395776 | Lung | SE_44657 | chr17:43388788-43394471 | NHDF-Ad | SE_46201 | chr17:43388243-43399699 | Osteoblasts | SE_47195 | chr17:43387470-43394435 | Panc1 | SE_48714 | chr17:43387602-43391213 | Right_Atrium | SE_49545 | chr17:43388257-43389771 | Right_Ventricle | SE_50169 | chr17:43387586-43397347 | Sigmoid_Colon | SE_51970 | chr17:43388168-43390648 | Skeletal_Muscle_Myoblast | SE_52792 | chr17:43387582-43397353 | Small_Intestine | SE_59053 | chr17:43370566-43412054 | Ly3 | SE_62481 | chr17:43366079-43396493 | Tonsil | SE_63770 | chr17:43387668-43391131 | HSMM | SE_65719 | chr17:43388051-43391087 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | CCCCAGGGCC AAAGCTCCCC TCCTGCTTCT TTGCTGACTG TCACTGGAAG CAGGCCATTT 60 TCCACCCTCA GGGTGGCTGG ACTTAGGAGT CAGTGACACT GCTGATCTGG GCTCTGTGCC 120 CCGTCCACGA TCCCCCCTCC GCTGTCAGCC CACTGGCCCC AGAAGCCTCC TGTTTACCTC 180 CTGCCCCCTG CCTCCATAGC CCTGGGGCTG GGATGAGGCT GATTTGTGGC AGAGGGCTCC 240 TCACGAAGGT CTGCTCAGGA CTTTCTCTGC AACTGTGCTG GGGAATAAAT CGCCTGTCAC 300 CTACACCCCT GCATGGGTGA CTCACCTTCC AGAGAAAGTG CTCTGCTCAC CTAAGCAAAG 360 CTGCTTGGAA AATGACTAAG GCACCTATCA AATGCACTCT GTGGGGCCAA CCAGTTATGG 420 AGCAAGGTCC AGGCACACTC TGCCTCTCAC CTCCAGCCTG AAGTCAAGTG CAGAGCTGCC 480 ACGCCAGGCC TGCTGGTTTC ATTTTCATCT GAACCGAGCT CCACATGAGG CTTGACATCC 540 GGTGATCTAT TTTTTCTAAA AACTAGCTTC ACTTTAGAAA 580
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