| Tag | Content |
|---|
EnhancerAtlas ID | HS177-09260 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr17:43376520-43377120 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| HNF1A | MA0046.2 | chr17:43377099-43377114 | CATTAATCATTAAAA | + | 6.07 |
|
| | Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
| SE_04602 | chr17:43375838-43377196 | Brain_Anterior_Caudate | | SE_11470 | chr17:43370585-43396257 | CD20 | | SE_23493 | chr17:43375953-43376589 | Colon_Crypt_1 | | SE_25878 | chr17:43364447-43377187 | Duodenum_Smooth_Muscle | | SE_26725 | chr17:43375925-43377213 | Esophagus | | SE_30018 | chr17:43375688-43377543 | Fetal_Muscle | | SE_31611 | chr17:43375930-43377146 | Gastric | | SE_32589 | chr17:43375211-43382510 | GM12878 | | SE_40748 | chr17:43375640-43377290 | Left_Ventricle | | SE_44657 | chr17:43375670-43377059 | NHDF-Ad | | SE_46201 | chr17:43376003-43377384 | Osteoblasts | | SE_47195 | chr17:43366097-43378703 | Panc1 | | SE_48714 | chr17:43375804-43377295 | Right_Atrium | | SE_50169 | chr17:43375823-43377262 | Sigmoid_Colon | | SE_54723 | chr17:43359357-43378642 | Stomach_Smooth_Muscle | | SE_59053 | chr17:43370566-43412054 | Ly3 | | SE_62481 | chr17:43366079-43396493 | Tonsil | | SE_65719 | chr17:43375788-43377557 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I045298 | chr17 | 43375682 | 43378039 |
|
Enhancer Sequence | ACCCCCAGGG TTTAAATTCT CAGATGAGTG AGCGGGGTAT AATTCCACAT TCCTCCCAGA 60
CTCTTGGGGG TAAAGTTCCA GATGGCAGAA GCTGCAGAGT AGGGGCAGAT GGCACTGGCC 120
AGGCACAGTG CCTCATTCCT GTAATCCCAG CATTTTGGGA GGCTGAGGCA AGAGGATCAC 180
TTGAGCCTGG GAGTTTGAGA TCAGCATGTA TAACATAACA AGACTGTGTC TTTATGAAAA 240
TAAAAAAAAA GAAAAAAGAA AAGAAAATCC TGCCATTGGT ACAGAACCCC CACCCTGGCC 300
TGGGCTAACA ATCTGACAAG TGACAGGCTT CTGAAAGGCT TGCTTCACTC TCTCCCTCAG 360
GCGGAGAAGG AGAATGGCCA TGTGATCCCT GGGACATAGA AACAGATGTC TGAGGAAGGA 420
GGAAGGGGCC TTACTGGGGC CTGCACTCAG GCACTGTGAG TGAAACGCAG CTGGAGGAAC 480
CTCAGAACTG GACTCATTGG CCTGCTTGAG GCCTGCTTCC CAGGAGAGTA ATTTCTGAAT 540
AAGCATTTCC CATTAAGGAG GATATGAAAT GTGAAGGTAC ATTAATCATT AAAATCTTAC 600
|
