EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-09223

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr17:40611790-40612610

Target genes

Number: 25
Name	Ensembl ID

NT5C3L	ENSG00000141698
GHDC	ENSG00000167925
AC003104.1	ENSG00000236194
STAT5B	ENSG00000173757
STAT5A	ENSG00000126561
STAT3	ENSG00000168610
PTRF	ENSG00000177469
ATP6V0A1	ENSG00000033627
AC067852.1	ENSG00000256929
NAGLU	ENSG00000108784
HSD17B1	ENSG00000108786
COASY	ENSG00000068120
MLX	ENSG00000108788
PSMC3IP	ENSG00000131470
TUBG1	ENSG00000131462
FAM134C	ENSG00000141699
TUBG2	ENSG00000037042
CCR10	ENSG00000184451
CNTNAP1	ENSG00000108797
EZH1	ENSG00000108799
HMGN2P42	ENSG00000214578
RAMP2	ENSG00000131477
VPS25	ENSG00000131475
WNK4	ENSG00000126562
CCDC56	ENSG00000183978

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REST	MA0138.2	chr17:40612014-40612035	TTCAGGACCACTGATAGCGCC	+	7.02
TCF7L2	MA0523.1	chr17:40611876-40611890	TTCCTTTGATGTCA	-	6.42

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_29743	chr17:40608089-40612641	Fetal_Muscle
SE_53648	chr17:40607954-40612946	Spleen

Enhancer Sequence

GTGTTACTGT CTTGAACATC ACATGCACAA AGGTTTGTTC GTTCAGATTT CTCAAAATGT 60
CTCCCAGCCT TCCAGAAGAG TAAATCTTCC TTTGATGTCA GACTCATCTA TCAGTACTCA 120
GTATAGATGC CCTTATGACA CTAAAAATAC TGTGCATTTT TCTGAGTTTG GATACTGGAC 180
AGGCTGTGCC TTACATTAGC TGATCGAGAA TAAATAATTG CAGTTTCAGG ACCACTGATA 240
GCGCCAGTTG TCTCATACCC GGCAACAGTA AGACAGCACT AAAACGAAAC CTTTATTGGC 300
TCATGAGATT TGACAGATGG AAGAATGTAA TTAATCTTGA AGGTAGGGTT GAGAAACAGA 360
AAGCTGCAGA GGTGGAAGGC TTATTCTCTG TGGCTTGATA AAACTGCTTT GTCATTATCA 420
GTGTGTTCCT GTCATGCTTG ATTTGAAATT GAGCTTAATA TGCAAACTGG TTGCTTTTTC 480
CAGATGACGG TTATTTGTTT GAATTCCTAA GTGGGGAAAT ATTGTTTTCT GAGGAATCTG 540
GAAGATTAAA CCCTTTAGTG TAGCCATAGC TTTAGGATAG TGCCAGAACT TTGGGCTTTT 600
AGAAATGCGC ATTGTCAGTA GAAGGGAGAA GGATAGTTAC AAGGCAGACA TCTTTATGAG 660
AGGGTATTGA AGGCCTCTTC TGTTTGTTTC CTGCACTAGC AAAAACAGAT TGAGCAGTGT 720
GAAACTCACT GCCTCAATAT TGTGTCCTGG GTATTTAAAG AGTTGTTTGA GGTTCCCAGT 780
TCCTGTCTTT AATCTGGATA CATTCTTATC AGTTGAGTTG 820