Tag | Content |
---|
EnhancerAtlas ID | HS177-09218 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr17:40124840-40125320 |
Target genes | Number: 18 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RARA(var.2) | MA0730.1 | chr17:40124991-40125008 | TGACCTCAGTCTGACCT | - | 7.02 |
|
| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_03345 | chr17:40123658-40125643 | Brain_Angular_Gyrus | SE_04994 | chr17:40117025-40130757 | Brain_Cingulate_Gyrus | SE_06054 | chr17:40116617-40130711 | Brain_Hippocampus_Middle | SE_06879 | chr17:40117505-40130709 | Brain_Hippocampus_Middle_150 | SE_07997 | chr17:40117011-40130656 | Brain_Inferior_Temporal_Lobe | SE_47911 | chr17:40124145-40126033 | Pancreas |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I041972 | chr17 | 40124278 | 40126844 |
|
Enhancer Sequence | GCCAGACACT GTTGGGACAA GGGATCGTGA GCAAAAATAG AAAAGCGTTT ATGCTGAGAT 60 GGGATGGGCT GTCTCAAAGA ATCAGATAGA AGCAGACATA TCATCAGATG GGAACCAAAG 120 TGTAAGAGCA GGTTTCCATC AAGGGCGAGT CTGACCTCAG TCTGACCTCA CCCTGTCCTC 180 CAGGGCGCTG TCTGGGTCCC AGGGGAAGCT GAGCGGTGCC AACAGTAGCA GCTGTTGTGT 240 GCGCGGACAC CCCTGTGGGC TGTTTACCTA GTCACTCTCA TAACCACATT AACTCTGAGG 300 TAGGCTCTGG TTCTCCCTGT TTTACGGGTG ATGAAGCCAA GGCACCGAGA GGTCAGCCAG 360 CCCGCTGAGG CCGGAAGCCA GTGTGCAGGG AGCTGGGCTC CCTCAGGAAG TCCGGCTGTC 420 CCCGTGTGGC CCTGTCTGAG CGCCTTCGTG TTTCTCACTT GAGCCTGGAG CGCCTATGGA 480
|