EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-09008

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr17:17566540-17567060

Target genes

Number: 16
Name	Ensembl ID

MED9	ENSG00000141026
RASD1	ENSG00000108551
SMCR2	ENSG00000223979
RAI1	ENSG00000108557
SREBF1	ENSG00000072310
AC122129.1	ENSG00000197815
TOM1L2	ENSG00000175662
LRRC48	ENSG00000171962
AC087163.3	ENSG00000230273
AC087163.2	ENSG00000232344
ATPAF2	ENSG00000171953
C17orf39	ENSG00000141034
DRG2	ENSG00000108591
ALKBH5	ENSG00000091542
LLGL1	ENSG00000131899
FLII	ENSG00000177731

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf1	MA0493.1	chr17:17566739-17566750	GGCCACACCCA	+	6.62
RFX1	MA0509.2	chr17:17566815-17566831	CGTCGCCATAACAACA	+	6.12
RFX1	MA0509.2	chr17:17566815-17566831	CGTCGCCATAACAACA	-	6.12
RREB1	MA0073.1	chr17:17566752-17566772	CGCCAAAACACACCCCCAGC	+	6.06

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_23959	chr17:17566352-17566753	Colon_Crypt_2
SE_34327	chr17:17565971-17567184	HCT-116

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH17I017662

chr17

17566049

17567770

Enhancer Sequence

TCCTAAGGCA CATTACACAC ACACACAGCC CACAGACACC CAGACCGCAC ACACAGCTCA 60
ACACCACACA CAGACAAACG CCCTCAATGC AGACATGCCC AGCCTTGCAC ACACAGGAAG 120
TCCACACACA AACACCAGCA CACTGCCTTG AACACGCAGG AATAGCATTC ACACGCCCAT 180
CCCCCTACAC AAACACACAG GCCACACCCA CACGCCAAAA CACACCCCCA GCGTCAGACC 240
TTGATGACTG ACAGCCCAGG ACTCCAGTGG GCTTGCGTCG CCATAACAAC AGACGGCTCC 300
GAGTCTTGGG CTGTGAGTGT GGTCGGGCTG TGAGTCACAG CTGCAGCAGA CGCTCCGCAG 360
AGCAGGAGCA GCCTGGCCCA GTGCGGACTC CCCAGTGCCA ACCTCTTATG GACGCAGAGT 420
GGACCCTCTC AGATGGGTGT GCAGTGTCCA TTAGCATTAC CCACAGGAGG GATGTGGCCC 480
TCAGGTGTCC CCTGTGTGCC ACACACTGGC GTGCGCCCAG 520