| Tag | Content |
|---|
EnhancerAtlas ID | HS177-06105 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr13:33778470-33779300 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr13:33778597-33778618 | TTCAACTTTCAGTTTCTGATT | + | 6.86 | | OLIG2 | MA0678.1 | chr13:33778683-33778693 | ACCATATGGT | + | 6.02 | | OLIG2 | MA0678.1 | chr13:33778683-33778693 | ACCATATGGT | - | 6.02 |
|
| | Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
| SE_02289 | chr13:33778286-33779713 | Astrocytes | | SE_07987 | chr13:33777844-33780884 | Brain_Inferior_Temporal_Lobe | | SE_25996 | chr13:33777047-33783517 | Duodenum_Smooth_Muscle | | SE_29884 | chr13:33776629-33782470 | Fetal_Muscle | | SE_36914 | chr13:33772821-33783999 | HSMMtube | | SE_42372 | chr13:33777975-33779704 | Lung | | SE_44343 | chr13:33777639-33783583 | NHDF-Ad | | SE_45449 | chr13:33777973-33782773 | NHLF | | SE_45536 | chr13:33775132-33783884 | Osteoblasts | | SE_51692 | chr13:33777919-33782801 | Skeletal_Muscle_Myoblast | | SE_55067 | chr13:33775989-33783388 | Stomach_Smooth_Muscle | | SE_63477 | chr13:33777905-33782920 | HSMM | | SE_68405 | chr13:33732914-33805785 | TC71 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | TCAATGACTA CATAGGTTGC ACAGAGTGTA CAAAGAACTC TGTCTACTGA TATTTCCTTC 60
CTCTCATTTT TCACATTTAG ACTGTAGGAA ACAGGCTAAG CTAATGAAAA GACAGTACGA 120
CAAAATCTTC AACTTTCAGT TTCTGATTTC CCCAATAAGA AAAGACATAA ATGTGTCATT 180
TCTTATGAGA CGCGTGGAAA GAACCCCGTA GAAACCATAT GGTTGTCAGT AACGGCATAA 240
TCTCATTCAA AGGTGCTAAG AACACTAATG AGACCAGGAT GTCAGGAAAA GCAGAAATAG 300
ATCAATATTT CTCTCCCATT TATAGTTGTC CTCACCATCA GTCTCTGCAC CAGCTCTATG 360
TAAATGAAAT CAATCAGCAA GGATTTCTGC AAAACGCATA AAACAGTTCT CCTCTCAGCT 420
CTACCGGAAG ATAAATGATT CCAGACGTTG GCCTGTGGCC ATTTTCCCAC ACATGCTCCA 480
GAGCTCTGAC ATCCATATTG GGCCATAACA CTGAGTGGTT TCTACTTTGG CGAGTTTACA 540
GCCAGCGCTT CCACTTCTGG TTTGGACTAG ACAGCCTGCT AATGCAGATG CAAAATAAGT 600
CCCTTTCCGC CTGTGTAAAT TGTAAAAGAA TTGACTTTTT CCAATAAAGG ACCTCCTGTG 660
AGCCCCCTGA AAACTTTCTG CTATCGCTCA TAGAATCTTA TCATTCTCAA TCACTGCTTT 720
AGATCCCCTT GGAATTAGAC GAATCCTGGC CTAATAAAAC ATGCGACATA TGACATCGAA 780
CGCAAACCAC TTAGATGTAA CATACAATTA CCAACAGCCC AAGTCCAACT 830
|
