EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-05896

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr12:120799140-120799970

Target genes

Number: 17
Name	Ensembl ID

CCDC64	ENSG00000135127
RAB35	ENSG00000111737
GCN1L1	ENSG00000089154
RPLP0	ENSG00000089157
RP1	ENSG00000255857
RPS20P31	ENSG00000240925
PLA2G1B	ENSG00000170890
MSI1	ENSG00000135097
RPS27P25	ENSG00000239881
TRIAP1	ENSG00000170855
RPL31P52	ENSG00000219355
POP5	ENSG00000167272
RPL11P5	ENSG00000242137
MLEC	ENSG00000110917
RP11	ENSG00000256364
UNC119B	ENSG00000175970
ACADS	ENSG00000122971

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RFX1	MA0509.2	chr12:120799691-120799707	GGTTGCCATGGCAACG	-	8.93
RFX1	MA0509.2	chr12:120799691-120799707	GGTTGCCATGGCAACG	+	9.03
RFX2	MA0600.2	chr12:120799691-120799707	GGTTGCCATGGCAACG	-	9.15
RFX2	MA0600.2	chr12:120799691-120799707	GGTTGCCATGGCAACG	+	9.33
RFX5	MA0510.2	chr12:120799691-120799707	GGTTGCCATGGCAACG	+	9.15
RFX5	MA0510.2	chr12:120799691-120799707	GGTTGCCATGGCAACG	-	9.33
ZIC1	MA0696.1	chr12:120799531-120799545	GGCCCCCCGCCGCG	+	6.1
Zfx	MA0146.2	chr12:120799406-120799420	GCGGCCGAGGCCTG	+	7.95

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_65438

chr12:120798724-120802171

Pancreatic_islets

Enhancer Sequence

CTCCACCCAA CCCTGCAAGG AAGGCCACCA TCCCTGGCCC CACTACACCC TTCAACCTGG 60
GCCTTGGCTG GAGAGGCCCC TAGTGGGACG GTGGGGTTGA GGCCAGGGCA GGGGGCAAGG 120
AAGATGGCTG GGGGTCCGGG TTAGCCCCAC CGGTGTCCCC TCCTGGGGCG AGCTGAGGGG 180
AGGGAGGCTC CCGGCCCAGT GTCCTTAATA GGCTTTGGTC TCCATGGGAA CCCGAGGGCA 240
GGGGGGATCG GGCGGGGGGA GGGGAGGCGG CCGAGGCCTG CTGACCAGTA GGAGCCGAGC 300
CGCCAAGTTC GGCGGCCGCT AAGCCTGAGT GGCAGCCATG GCGGCTGACC ATTGTTCCCC 360
CCTCGGCGGC GGCCCCTCGA TCCGGGCGGG GGGCCCCCCG CCGCGGGGCC CTTGGCATTC 420
CCGGCTGTCC CCCTCGCTCC CTGGCAGCCT ATTCTCCGGC TCCCCCTGGC CTCCCCGGGC 480
CGGTTTCACA TGCCAACGCC GATTTAGGCC CGAACAAAAG ACGCGGCCGC TGACGGCTTC 540
TCCTGGGGCC CGGTTGCCAT GGCAACGCCG GCCCCGGGGG CAGGCGGCCT CCAATCACAG 600
CTGCTGGATC AGATTAGTGC GAGCTCTAAT GCTCGGCGCT CAGACACAAA GACACCCCGC 660
CGCAGCCGAG CCGGGCCTGC TGCTTCCCAG GAGCGCCCTA CCCTCTGGGG CCCGGGCCCG 720
CCCGACCTGC CCTCTGTCCC GGACCCAGGT GCCCACCGAG GCACGAAAGC CGAGGCCTCT 780
GGTCCCCCAC ACCACCAGCC TCAGCTGGCC AGGGGACACC TCCCCCCCCC 830