| Tag | Content |
|---|
EnhancerAtlas ID | HS177-05703 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr12:104917730-104918260 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr12:104917807-104917828 | TCTTTCTTTCTTTTTTTTTTT | + | 6.25 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_09142 | chr12:104916223-104918370 | CD14 | | SE_13426 | chr12:104916367-104918348 | CD34_Primary_RO01536 | | SE_14625 | chr12:104916537-104918408 | CD4_Memory_Primary_7pool | | SE_25350 | chr12:104916439-104918003 | DND41 | | SE_49896 | chr12:104912789-104918401 | RPMI-8402 | | SE_59750 | chr12:104849529-104923220 | Ly4 | | SE_62327 | chr12:104849575-104918276 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH12I104522 | chr12 | 104916300 | 104918196 |
|
Enhancer Sequence | TTTCTGGGGT GAAAGACAGA AGCTCTGATC TGCAACCTCA AAGCTGCAGT GTTCAGGAAA 60
GCCAGATATT TTTGTTTTCT TTCTTTCTTT TTTTTTTTTT TTTTTGCCTC TCAATTGGAG 120
TCATATAGTG CTGCAGCAAG ACTTGTTTTC TGGATTAGTT ACTGACCCAA AGTATTTTTC 180
TTGCGAATAA ATGTTGCTTC CCACCACAGT GACTCGAGAA TAGGAAGGAC ACATGGAGAG 240
GATTATAAAT AGGTTTTGGT GCCAACAGAT AGGGCAGCCT TCCAGAAAAA TTATTTGCAT 300
TCACCATGTG TTTGTTAAAT GGGCAATTAT GGAGTGTACA GTTGCTAGCA TTTGTTTGCC 360
TCTCCTTGGG AAGGCGATAG TTCAGTAGTG GCCTGCATTT GACCCTTAGT CAGAGAGCTA 420
GTGGGCTTTG CAGCTAGTTC ATTCATTTGT CCTAATCCAG GATGGACTGT TTAAAAATAT 480
ATATCCAGCC AGAAAACAGA CATAGACACG TATAGGGAAT GAGTTCTTGA 530
|
