EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-05312

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr12:54520400-54521330

Target genes

Number: 17
Name	Ensembl ID

HOXC5	ENSG00000172789
HOXC6	ENSG00000197757
HOXC9	ENSG00000180806
HOXC8	ENSG00000037965
HOXC4	ENSG00000198353
AC012531.25	ENSG00000260597
RP11	ENSG00000249388
Y	ENSG00000202146
SMUG1	ENSG00000123415
CBX5	ENSG00000094916
HNRNPA1	ENSG00000135486
NFE2	ENSG00000123405
COPZ1	ENSG00000111481
GPR84	ENSG00000139572
ZNF385A	ENSG00000161642
ITGA5	ENSG00000161638
GTSF1	ENSG00000170627

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_31781

chr12:54519734-54522721

Gastric

Enhancer Sequence

GCTGGGCCCG GGACGGGTGC GATTCAGCCC GAGAACAATC TGTCTCTCCC CGTCCCGGTC 60
TCTCCCTCCC CTTACCCCTG TTTCCCCTGC AGGCTGACAT ATTAATCTGC CTTCCCCCGG 120
GAGAAATTTG GGCTGGGGTT GGGCTTCTGT CAGATGCATG GGGTCAGAGC AGCTTTCCTC 180
CCCGAGTTTA GGGACTAAGG TGGTAGCTGG CAGGGGAGGG GGAGGGTTGC TTCCGAAACT 240
GAGGATTGAG GGGAGGGTTA GGGGCCGAGA AACCCAGAGT CTGAGGGAGA CGACTTCTTT 300
CCTCAAACGC AACTTGGGGG AACTTCGGAA AAGTTTTTTG AGGGGAGATG GAGAAGGGAG 360
CGGAGTTGGG GTTTCGAGGG CTAAAGTGGG AGAGAGGGTG CTCCGCTTCC CGTACTGAAG 420
GAAGGATGTG TGTGCTTATT CCCCAGTCGG GACCGATTAC CAGCCTAGAA AAACCCAGCC 480
GCGTCCCAAA CCCGCTCACC CCAGCAGGCC CTTAGAGACG CTTGGAGATC CCCAGACACG 540
CCCCGCGGAA AGGGAAGGAA ATGCCAGCCC GAGTTGCCGA CTCTGCCGGG ACGGGGCGGG 600
GGATCCGCCC AGAGCGGTCC CCTGCTGTCC TGGGCCCTTA CGTTGATTCT AAGTTAGGAG 660
TGATCTGAGA GAGGGAATAA CTCCCAAAAA TCTTTTTTTT TTTTTTCTGA ATCCAATTTG 720
AGTCAGAGAC CCATTTCCTT GAGATGGAGC CAAGCGAGTG CCCCCTCCCG CCTCCAGCAC 780
AATCTCCCGC TCTTCTCCAG TTCCCAAAGG AGGGCAAGGA AAAGGCCCCT ACTCTCCTCC 840
CAGGGCTGAG ATTTCCTCCC CCACCCAAGA GATGCCCCAG GAGGAAGGAA TGGAGAGGTT 900
CTTCAAAGGG CAGTCAAGAG CAGAGGGTGG 930