EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-05268

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr12:50594230-50594550

Target genes

Number: 24
Name	Ensembl ID

TMBIM6	ENSG00000139644
LSM6P2	ENSG00000257730
RP11	ENSG00000258057
NCKAP5L	ENSG00000167566
BCDIN3D	ENSG00000186666
FAIM2	ENSG00000135472
AQP2	ENSG00000167580
AQP5	ENSG00000161798
AQP6	ENSG00000086159
RACGAP1	ENSG00000161800
ASIC1	ENSG00000110881
SMARCD1	ENSG00000066117
COX14	ENSG00000178449
orphan	ENSG00000257755
CERS5	ENSG00000139624
RP3	ENSG00000257298
LIMA1	ENSG00000050405
AC008147.2	ENSG00000203433
AC140061.11	ENSG00000203431
AC140061.1	ENSG00000196082
AC140061.4	ENSG00000203423
AC140061.3	ENSG00000203422
LARP4	ENSG00000161813
FAM186A	ENSG00000185958

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_36091	chr12:50594333-50598681	HMEC
SE_37462	chr12:50588511-50597088	HSMMtube
SE_38771	chr12:50594148-50598391	HUVEC
SE_45867	chr12:50593984-50598711	Osteoblasts
SE_47446	chr12:50594022-50598779	Panc1
SE_51997	chr12:50594168-50595540	Skeletal_Muscle_Myoblast
SE_63799	chr12:50594154-50595556	HSMM

Enhancer Sequence

GCCTCACCCT CCCAAAGTGC TGGGATTACA GGCGTGAGCC ACTGTGCCCA GCCTCCAAAT 60
AGATTTTAAA AAATCACTTC AGCTCTTTGC CTTCTGAGCA TCTGCTGAGC AAAATAATTT 120
TCCAATGAAG GCTCATTATT TGGTCAGCTA TAAGTTGCAG AGCTACTCAA CTGAAATTAT 180
GTGACCTGCA AAAATGGCAA TCTGTCCTGG CAGCTGTTAC CAAATTCCCA GACACTCTAC 240
AGCCTAGAGT TAGAGTTGTT TCTAATTTCA AGCATCTAAT TTAGAACACA TGCTTCCTTG 300
GCAACTGGAC ATCAGACTTT 320