| Tag | Content |
|---|
EnhancerAtlas ID | HS177-01852 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr1:210052740-210053370 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| TFAP2C | MA0524.2 | chr1:210052747-210052759 | TGCCCCAAGGCA | + | 6.62 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_03419 | chr1:210051897-210055971 | Brain_Angular_Gyrus | | SE_04636 | chr1:210052041-210055132 | Brain_Anterior_Caudate | | SE_05122 | chr1:210051677-210059030 | Brain_Cingulate_Gyrus | | SE_07368 | chr1:210051718-210058792 | Brain_Hippocampus_Middle_150 | | SE_08079 | chr1:210051719-210058732 | Brain_Inferior_Temporal_Lobe |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I209879 | chr1 | 210052676 | 210053899 |
|
Enhancer Sequence | ATGATTCTGC CCCAAGGCAG GGAGGAGAGA AAATGTCCTT CAGTGAGACC CTTCAGCCTG 60
AGAATCCATA ATTACCGTGT AGACTGGCTG CATAATATGA CCTATTCTCC AGCTCCCTGA 120
GTGATGGCAG GTGTGGTTAA CTCGACAGTC TTCCTCCTGT GCCGTACATC TTCTCCTTTC 180
CCCAATTACA CCGACAGATT ATTCCTTCCT GGTGTCCTTT TTTTTCCCTT TGTCTCAGAA 240
ATAACGAGGT GTCATGAGTC TGCCATACAT CACCCTATCG GCAGCGAGTG GTGACTTCTG 300
ATTAGTGGAA TACCATGGGA GCAGAGGGAG GGAGCGTGGC AGCACCGGCT GCTCTGCCTG 360
GCAGCCCTGT CGCGCCTCAG AGACTGGCGT TTTGTCTGTG TCAACAAGAA TCCGCCTGGA 420
TATTACTCAT GTAGCCGGAC ATAATGAATT CAGCTGTTTG CTAGTGCAGC AAATAGGTTT 480
TTTTGCCAGT GATATTAGGA TCAAGCTGAG TAATAGGATG TGTCCATACC AGAGTAATGT 540
CCATTTATTA GCTTCTGTGA GAACACACAC ACATTAAGAA AAATCACATT TCGCGTGGCT 600
CTGTAGCTGA GGGAATTGCA TGTTAAAAAT 630
|
