EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-01385

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr1:155435520-155436060

Target genes

Number: 27
Name	Ensembl ID

ADAM15	ENSG00000143537
EFNA4	ENSG00000243364
EFNA3	ENSG00000143590
EFNA1	ENSG00000169242
SLC50A1	ENSG00000169241
RP11	ENSG00000250784
DPM3	ENSG00000179085
TRIM46	ENSG00000163462
KRTCAP2	ENSG00000163463
MTX1	ENSG00000173171
THBS3	ENSG00000169231
GBAP1	ENSG00000160766
MTX1P1	ENSG00000236675
AL713999.1	ENSG00000216109
GBA	ENSG00000177628
FAM189B	ENSG00000160767
SCAMP3	ENSG00000116521
HCN3	ENSG00000143630
CLK2	ENSG00000176444
PKLR	ENSG00000143627
FDPS	ENSG00000160752
RUSC1	ENSG00000160753
MIR555	ENSG00000207720
U6	ENSG00000207134
ASH1L	ENSG00000227773
snoU13	ENSG00000238805
POU5F1P4	ENSG00000237872

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MSC	MA0665.1	chr1:155435735-155435745	AACAGCTGTT	+	6.02
MSC	MA0665.1	chr1:155435735-155435745	AACAGCTGTT	-	6.02
MYF6	MA0667.1	chr1:155435735-155435745	AACAGCTGTT	+	6.02
MYF6	MA0667.1	chr1:155435735-155435745	AACAGCTGTT	-	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I155465

chr1

155435592

155437570

Enhancer Sequence

AACGACTGAA CCAAAATTGG TTGTAATAAA AATGGCTACC ATAGTAAAGG AATATGAACA 60
TAAAATATCA AACTATTTGA GAACTTCTGG TCAAGATTTT TTTTGTTCCC AGATTCAAGT 120
TCTGAATCCT TTGGTATGGT TCACAGTTGA TAGCCACCTT GGAACCTTCT TGTGAATGAG 180
CTGAATGCTA AGGTAAAAGC TGGGTCCACA ATAAAAACAG CTGTTTTCAA TTGTGGGAAA 240
TACAGAAAGC AATACATTTT ATCTGATGCA CCAACTAAAT GCACTACAAG AGAGTATGAC 300
TCAGAGCCTG TTCTGGCGAT TTTTAAGCTA TAAAGTCTGT TTTGGCCGGG CGCTGTGGCT 360
CATGTCTGTA ATCCCAGCAC TTTGGAAGGC CGAGGCAGGC AGATCACGAG GTCAGGAGAT 420
TGAGACCATC TTGGCTAACA CGGTGAAACC CCGTCTCTAC TAAAAATACA AAAAATTAGC 480
CAGGCGTGGT GGCGGGCACC TGTAGTCCCA GCTACTTGGG AGGCTGAGGC AGGAGAATGG 540