EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-01378

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr1:155057880-155058000

Target genes

Number: 35
Name	Ensembl ID

KCNN3	ENSG00000143603
PMVK	ENSG00000163344
PBXIP1	ENSG00000163346
PYGO2	ENSG00000163348
SHC1	ENSG00000160691
CKS1B	ENSG00000173207
DCST2	ENSG00000163354
DCST1	ENSG00000163357
RP11	ENSG00000232093
ADAM15	ENSG00000143537
EFNA4	ENSG00000243364
EFNA3	ENSG00000143590
EFNA1	ENSG00000169242
SLC50A1	ENSG00000169241
DPM3	ENSG00000179085
HMGN2P18	ENSG00000223452
TRIM46	ENSG00000163462
KRTCAP2	ENSG00000163463
MUC1	ENSG00000185499
MTX1	ENSG00000173171
THBS3	ENSG00000169231
GBAP1	ENSG00000160766
MTX1P1	ENSG00000236675
AL713999.1	ENSG00000216109
GBA	ENSG00000177628
FAM189B	ENSG00000160767
SCAMP3	ENSG00000116521
HCN3	ENSG00000143630
CLK2	ENSG00000176444
PKLR	ENSG00000143627
FDPS	ENSG00000160752
RUSC1	ENSG00000160753
MIR555	ENSG00000207720
U6	ENSG00000207134
snoU13	ENSG00000238805

TF binding sites/motifs

Number: 1

TF

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5

chr1:155057958-155057968

GGGGCGGGGC

-

6.02

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_24349	chr1:155054349-155058894	Colon_Crypt_2
SE_25203	chr1:155054005-155059103	Colon_Crypt_3
SE_27181	chr1:155052973-155059081	Esophagus
SE_28639	chr1:155057000-155058665	Fetal_Intestine_Large
SE_41889	chr1:155051383-155059366	LNCaP
SE_42320	chr1:155056778-155058647	Lung
SE_61971	chr1:155049467-155060409	Toledo

Enhancer Sequence

GTGAGTGACG GCGGCCGGGC GGGCGGGTCT GAACGCGAGA GTCTGAGTGA CAGCCGGGGG 60
GTGGAGCCCC TAGGCTCCGG GGCGGGGCCG GCGCGGCGGG CGCCAGGTCT CGCGGCTGAG 120