EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-01231

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr1:120415220-120417260

Target genes

Number: 12
Name	Ensembl ID

GAPDHP58	ENSG00000229570
GAPDHP32	ENSG00000226443
RP4	ENSG00000260941
HSD3BP5	ENSG00000198857
ZNF697	ENSG00000143067
PHGDH	ENSG00000092621
NBPF7	ENSG00000215864
PFN1P9	ENSG00000227205
ADAM30	ENSG00000134249
RP5	ENSG00000261662
NOTCH2	ENSG00000134250
FAM72B	ENSG00000188610

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFIA

MA0670.1

chr1:120415435-120415445

GGTGCCAAGT

6.02

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I119873	chr1	120416338	120416659
GH01I119874	chr1	120416901	120417050

Enhancer Sequence

ATACTGAGCT GTGGGTACTA TTATGTCCAT ATGACACACA GGGAAAGGAT AGGAGGTAAC 60
CCTGGTCCCA GCCAGGCCAG CGATGTCACC AGGACTCTAG GAGGCCCTCT GTGCAGAGAT 120
GGTGCTGGCA ACCACAAGCC ATACCTAATG TCCCAGAGCA ACAGCAGTGC TTCAGAGGAG 180
CCTGGAGCCC TTTGTATTCT AAAGCCTGGG ACTGTGGTGC CAAGTGCTTT CCGGGGGGAA 240
AGGATTGTCC TGACTCCTGG GACCTCTCAA AGCAGAGAGT GTGGAAACTG GCACAGCACA 300
GCACAGCCCA GTTACCTGCA GGTATTTTGT GAGCCCAGAG GATAGAGTTC CTTAAGGACA 360
GGGTTGTCAG AGTGTTCCAG GTGTCTTAGA GGCATTTAGA CAGGATGTCT AAAGGCAGAA 420
GCAAGGGTTG GTAATCTCCA ACAGAGTCCA GAAAATTTGG AGAGAATGGA CAACAGAGAT 480
GAGACAGAGC CTGCAAGACA TAGCATGAGA TTCCCACATG CACTTCTTAT GTTCTCCCGA 540
AAGATCATTC CTGATGGAAA CATGTGGAAG CATGCTTGCA TGCATGCCTA TGCACACACA 600
CACACACACA CACACACACA CACACAGAGC AACAACAAAA TAAAAAATAG AAGCTGGCAG 660
CAATGGTGCA GTGACCGCAC TGCAGCCTTT TACTTGAACT TGATGGCACA GGGAAATGTC 720
CTGACAGAAA GGGCAGGTGG TTTATAAGCC CCAGTGAGAT GATGTTCTAG AGATATGCCT 780
GGATACCTGG ATGTTCCTTT AGGAAATGAA AATAGTCCTG AGGGTTGGAT AAAGATGAAG 840
CACTTTATTA AACTGTATTT GGCCTCAGGC CATCTTATCA CAGAATTTCT GCTCTGGTAG 900
ATATCTACAC GAGAAAGAAA GAGGTTTTAA AGACCCCAAA ACTAATTAGA GCAGTGTAGA 960
TAAATGTTTT GTCTACATAG ATTGTTATTT GATTTTTAAA AAAAGGTTCA TTTCCTTCAG 1020
AATTAAAGTT GACCCTAAGC TCAGCTCACA AATTCTTCTC TGTGGCTGCT TTTGGTTTTG 1080
GGTTCACGCC TGGGGCAGAT GTGATTTATT TTCTTGTGCT TGTTATTAAT CCAGAAATGT 1140
AATTTCAGTG TGGGCTTGGA ATAGTGCTCT GGGACATGAA GCAGAAGTGA ACAATGGAGG 1200
TTAGGTGGAT ATGAGTCAAA GAAAACTGAC CACACTTTCT CTCAGCTCTC TTTTACAGCA 1260
TGATGAGCCT CAAGAGCTGG GGGAGGTTTC CATTGCTGTC AGTGCTCCCA GTTCAGTAAA 1320
AATGTTTGGC ATGAGTTGAC AAGTACATTT GCCAGAGGTG GTGCATGAGC TCCTTGTGTC 1380
TGGGAATGGA GATTTTCATC ATGGTGCTTT TATTTTGAGC TAGATGTTCC TGTTTCAGTC 1440
CAGCCTCTAG CTGGTGAAGA GTTATTCTCT AGAATGAGGC TTTTCTCACA ACCATCTTTC 1500
TATTTTTTTT TAAGACTGTA GGGATGGAGC TTTTTGATTG AGAGAGGAAA ATACTTAAAT 1560
CTGGGACTGG ACAGGTATTC TCACTTATAT TCTGCATGGA GGAATGGGAA AATGTGTCTC 1620
ATATTTCAAT TTATCTGCTG TCAACTTGAT TGTGAGGACT CTACAGTAAG CCTGTTCTCT 1680
GAATTCTACC TCCTCACCCC AAATTCAGTT TCCTATCAGT TGGGCAGACT GCCACAGTGC 1740
TAACTGGAAG CACCCTTGCC CCAGATGTCC CAGAGTTGAT TAGTGGCGCT GTTGGTGGAA 1800
ACAGGGACAA GTGGATAGTC TAGCCCCACA TGCAGGAGGT GAGACTGCAG GATCTTTCCT 1860
GCCCTGCAGT CCATGACTCA GGGTGTAGCC TTGGCTATGT TACAGGCACG ATCCAGTTTA 1920
ACTTCATGGC TCTCTAAGCC TCCATGGAAT GATTGTAAGT AGGTTCAATA ACATATTTAT 1980
TGAACAACTA CTACATGAAG TATATTATGC TAGATGCTGT AAGAGACACA AAGAAAAAAT 2040