EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-01159

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr1:110605100-110605770

Target genes

Number: 13
Name	Ensembl ID

RP5	ENSG00000235045
GSTM4	ENSG00000168765
GSTM2	ENSG00000213366
GSTM1	ENSG00000134184
AC000032.2	ENSG00000260246
GSTM3	ENSG00000134202
CSF1	ENSG00000184371
AHCYL1	ENSG00000168710
FAM40A	ENSG00000143093
RP4	ENSG00000258686
ALX3	ENSG00000156150
KCNC4	ENSG00000116396
RBM15	ENSG00000162775

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)	MA0730.1	chr1:110605420-110605437	AGGTCAGCAAAAGGCCA	+	6.13
ZEB1	MA0103.3	chr1:110605439-110605450	CCCACCTGCCC	+	6.14

Enhancer Sequence

TCATTTAATC AACATTTATG TGTCAGCCTC TAAGCTAAAT TTAACAATGT CAAAATAAAA 60
CCAACCAAAC AAAACAACCC CTGCTTTCCA GGGATATCTA GCTGGGAGTC ACAACAGAAG 120
AAAGCTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGGAG TAATCCGTCT 180
ACCCCAGCTG GGATCAGGCT TCCTGCCCCC ATGGTCATTC CTACACATGC AGGCAGGTAA 240
GGCACCAACA GTGAAGGGGC TGTGCATACC CCATCCCCCT AGCTCCCAGA TTGCCAAGAT 300
AAGAAAGCAG GCCTGCAGCA AGGTCAGCAA AAGGCCACCC CCACCTGCCC AGCTGCCTGG 360
ATTTCCTTTC TCTGCTCTCC CTCCCCTGAC AGAGGATGAG GGAGCTTACA GCCAGTGAAT 420
CTGGCTATTG GAACTCACTT TTCTGTCACC ACCCATTCTC CCTTGGGGAT CCCGCTGTAG 480
GCCTCCCCTG GGCTCTGGAC CTGCCCTCTG CATTATCTGG TGTGTAGTCT CATTCTTCCT 540
CTCCATAGGG CAGGGTGTAT GGGTGGGTTT CACACCCCTG CCAGAGAAAA CATTCCTACT 600
CCAGGGTCTC CATCCTTCAG GAAGCTTCTA GACTAGGGGT GAGGGCCTCA TGGCTACTCC 660
TGCACCCTCT 670