EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-00629

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr1:54819610-54820010

Target genes

Number: 15
Name	Ensembl ID

LRRC42	ENSG00000116212
HSPB11	ENSG00000081870
RP1	ENSG00000219102
TMEM59	ENSG00000116209
TCEANC2	ENSG00000116205
RP4	ENSG00000225183
AL353898.3	ENSG00000237611
AL161915.1	ENSG00000212670
AL357673.1	ENSG00000248835
MRPL37	ENSG00000116221
CYB5RL	ENSG00000215883
RP11	ENSG00000256407
C1orf191	ENSG00000198711
RP5	ENSG00000225632
SSBP3	ENSG00000157216

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_04901	chr1:54818784-54824846	Brain_Cingulate_Gyrus
SE_07802	chr1:54818982-54827937	Brain_Inferior_Temporal_Lobe
SE_31383	chr1:54819678-54824938	Gastric
SE_33414	chr1:54819709-54824804	H2171
SE_41605	chr1:54819329-54820954	LNCaP
SE_59737	chr1:54819743-54855281	Ly4
SE_65414	chr1:54819796-54823464	Pancreatic_islets
SE_66951	chr1:54819709-54824804	H2171

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I054353

chr1

54819625

54823534

Enhancer Sequence

AGACTGCAGC ACAGAGGGGA CTGACTCCCC AAATCATACA GGGACTAGAA ACCGAACTGG 60
ACCCAGATCC AGGGCTGTCA GTGACTGACC ACTCCCCCGG CTCAGCAAGA GCACTCCTAC 120
ATCCCAATGC TGCACCAGGA TGCCCAACAA AAGATGGGAC TCCCATTTCA CTATCTGCAA 180
CCTGATCTTA TCTAGAAAGC CTGGAGCCAG CGCATACCAC TGTCTGCAGA CTCTACAGCC 240
TTACAAGGCT GCCTGTCTGC TCTGCTTTCT GCAGCATCAG TGCACCTCCC AGCCCCTCAA 300
ACTCCTACCC ATCAAAACCA CATGCCAGCC TTTCCCAGGC ACCTGCCACA TGCAGGGCAG 360
GTGGACAGAC CAGCAATGAC ACGGTACAGT GAGGCAAGTC 400