EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-00234

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr1:19775820-19776050

Target genes

Number: 15
Name	Ensembl ID

UBR4	ENSG00000127481
RP1	ENSG00000230424
MRTO4	ENSG00000053372
KIAA0090	ENSG00000127463
AKR7L	ENSG00000211454
AKR7A3	ENSG00000162482
U6	ENSG00000200403
AKR7A2	ENSG00000053371
PQLC2	ENSG00000040487
AL445163.1	ENSG00000240490
CAPZB	ENSG00000077549
MINOS1	ENSG00000173436
RP5	ENSG00000226396
NBL1	ENSG00000158747
HTR6	ENSG00000158748

dbSUPER

Number of super-enhancer constituents: 37
ID	Coordinate	Tissue/cell

SE_00361	chr1:19773803-19779686	Adipose_Nuclei
SE_01199	chr1:19773989-19776745	Adrenal_Gland
SE_01631	chr1:19773904-19776430	Aorta
SE_02919	chr1:19775652-19776214	Bladder
SE_03519	chr1:19775379-19775883	Brain_Angular_Gyrus
SE_04046	chr1:19774865-19776161	Brain_Anterior_Caudate
SE_05833	chr1:19773888-19776463	Brain_Hippocampus_Middle
SE_07251	chr1:19774012-19776615	Brain_Hippocampus_Middle_150
SE_08066	chr1:19774017-19776207	Brain_Inferior_Temporal_Lobe
SE_09593	chr1:19774011-19776421	CD14
SE_17553	chr1:19774002-19776176	CD4p_CD25-_CD45RAp_Naive
SE_18410	chr1:19770426-19778429	CD4p_CD25-_Il17-_PMAstim_Th
SE_19269	chr1:19773806-19776317	CD4p_CD25-_Il17p_PMAstim_Th17
SE_25786	chr1:19773798-19779591	Duodenum_Smooth_Muscle
SE_26537	chr1:19773934-19782356	Esophagus
SE_28668	chr1:19774597-19776172	Fetal_Intestine_Large
SE_29645	chr1:19773867-19779844	Fetal_Muscle
SE_31164	chr1:19773914-19776305	Fetal_Thymus
SE_31447	chr1:19773985-19776805	Gastric
SE_39233	chr1:19773924-19776293	IMR90
SE_41031	chr1:19774067-19776316	Left_Ventricle
SE_42185	chr1:19773945-19776397	Lung
SE_44300	chr1:19771828-19776426	NHDF-Ad
SE_45110	chr1:19774011-19776427	NHLF
SE_45720	chr1:19773884-19782578	Osteoblasts
SE_46635	chr1:19775023-19776048	Ovary
SE_47234	chr1:19762903-19786782	Panc1
SE_48688	chr1:19774253-19776259	Right_Atrium
SE_50058	chr1:19773907-19776695	Sigmoid_Colon
SE_51211	chr1:19773820-19782386	Skeletal_Muscle
SE_52345	chr1:19773912-19776766	Small_Intestine
SE_53453	chr1:19774354-19776364	Spleen
SE_54550	chr1:19773634-19779785	Stomach_Smooth_Muscle
SE_56083	chr1:19773877-19779671	u87
SE_62519	chr1:19761354-19815005	Tonsil
SE_65446	chr1:19773584-19777190	Pancreatic_islets
SE_67779	chr1:19773877-19779671	u87

Enhancer Sequence

GGAGCTGAGG AACGGGGAAG ATTTTGCCAG TGAATCAGAC CTTGTCTCTA TGCCATCCAC 60
TAGCATCCTT AAGGTGAGGA AAGAACCAGC AGGTCTCAGG GTGAACCATG GTATGTCCAC 120
TCAGTGGAAC AGTACGAAAC AGCTAAACCC AGGTTCGTAA AGAAAATGTA GGCTGGACTG 180
GCTGGGGGCT GTGGCCCACA CCTGTAATCT CGGCACTTTG GGAAGCTGAG 230