Tag | Content |
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EnhancerAtlas ID | HS177-00233 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr1:19774710-19775320 |
Target genes | Number: 15 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
SCRT1 | MA0743.1 | chr1:19775279-19775294 | GGCCACCTGTTGCTC | - | 7.63 | SCRT2 | MA0744.1 | chr1:19775281-19775294 | CCACCTGTTGCTC | - | 7.22 |
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| Number of super-enhancer constituents: 42 | ID | Coordinate | Tissue/cell |
SE_00361 | chr1:19773803-19779686 | Adipose_Nuclei | SE_01199 | chr1:19773989-19776745 | Adrenal_Gland | SE_01631 | chr1:19773904-19776430 | Aorta | SE_02919 | chr1:19774021-19774933 | Bladder | SE_02919 | chr1:19774950-19775606 | Bladder | SE_04046 | chr1:19774865-19776161 | Brain_Anterior_Caudate | SE_05077 | chr1:19773902-19774864 | Brain_Cingulate_Gyrus | SE_05833 | chr1:19773888-19776463 | Brain_Hippocampus_Middle | SE_07251 | chr1:19774012-19776615 | Brain_Hippocampus_Middle_150 | SE_08066 | chr1:19774017-19776207 | Brain_Inferior_Temporal_Lobe | SE_09593 | chr1:19774011-19776421 | CD14 | SE_13780 | chr1:19774778-19775546 | CD34_Primary_RO01536 | SE_14589 | chr1:19774812-19775740 | CD4_Memory_Primary_7pool | SE_17553 | chr1:19774002-19776176 | CD4p_CD25-_CD45RAp_Naive | SE_18410 | chr1:19770426-19778429 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19269 | chr1:19773806-19776317 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_22607 | chr1:19774493-19775504 | CD8_primiary | SE_25786 | chr1:19773798-19779591 | Duodenum_Smooth_Muscle | SE_26537 | chr1:19773934-19782356 | Esophagus | SE_28668 | chr1:19774597-19776172 | Fetal_Intestine_Large | SE_29645 | chr1:19773867-19779844 | Fetal_Muscle | SE_31164 | chr1:19773914-19776305 | Fetal_Thymus | SE_31447 | chr1:19773985-19776805 | Gastric | SE_39233 | chr1:19773924-19776293 | IMR90 | SE_41031 | chr1:19774067-19776316 | Left_Ventricle | SE_42185 | chr1:19773945-19776397 | Lung | SE_44300 | chr1:19771828-19776426 | NHDF-Ad | SE_45110 | chr1:19774011-19776427 | NHLF | SE_45720 | chr1:19773884-19782578 | Osteoblasts | SE_46635 | chr1:19774479-19774912 | Ovary | SE_46635 | chr1:19775023-19776048 | Ovary | SE_47234 | chr1:19762903-19786782 | Panc1 | SE_48688 | chr1:19774253-19776259 | Right_Atrium | SE_50058 | chr1:19773907-19776695 | Sigmoid_Colon | SE_51211 | chr1:19773820-19782386 | Skeletal_Muscle | SE_52345 | chr1:19773912-19776766 | Small_Intestine | SE_53453 | chr1:19774354-19776364 | Spleen | SE_54550 | chr1:19773634-19779785 | Stomach_Smooth_Muscle | SE_56083 | chr1:19773877-19779671 | u87 | SE_62519 | chr1:19761354-19815005 | Tonsil | SE_65446 | chr1:19773584-19777190 | Pancreatic_islets | SE_67779 | chr1:19773877-19779671 | u87 |
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Enhancer Sequence | ACCCGCTTCT CTCCAGGCAC TGCCCACCCA TGAGGGACTT TCCCTTTTCC AAGTGGCAGA 60 GCTCCACTCC TGGCTGTCAA CCACTGTGAA TGGGACATCT CCTCTCCTCC TCCCTTCCAC 120 CCTTTCGGGA GAGCATTTGA TTAATATTTT TCTACTTTTG TTGCCCCAAG TTGAGGAGTG 180 TTTAGAGATG GAAAATAATA CATTACTTCC CTCTCTGACA ACCGCCTTAA TCCACAAAGC 240 CCAGAGGTAA AAACTCACAA GCTGTTTCTT CTCTGAACCG CAGAAACAAA CCTGGTTGCA 300 GTTGGGGCAC TGTGGACCAG AGAAAGATGC AGTGTTTCAT CATTACCTAC CCATGATAAA 360 TGCTGTAGGG GTTTTTTCTT ATTCAACTGC AGATGATTCA CATTAGAAGC TGCCTGGTGA 420 CCAGACTAAC TTTCCTCCCT ACTTGGGCAA AAAGTTGTCA CCTAGCCAAC ACATTTCCTG 480 GGGGTAGACT GTGCCTTGTG GATTCCATCA GCTTTGCTAT TTACTTCTCC CTTCACCCTG 540 GCAGTTAACA TTTCAACCCT GATGGCCACG GCCACCTGTT GCTCCTCCTC CCCCCTCAGA 600 TCTAAAGTGC 610
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