EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-00135

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr1:12011930-12012440

Target genes

Number: 17
Name	Ensembl ID

AGTRAP	ENSG00000177674
RP11	ENSG00000177553
CLCN6	ENSG00000011021
MTHFR	ENSG00000177000
NPPA	ENSG00000242349
NPPB	ENSG00000120937
RP5	ENSG00000224904
RNU5E	ENSG00000199347
KIAA2013	ENSG00000116685
PLOD1	ENSG00000083444
MFN2	ENSG00000116688
MIIP	ENSG00000116691
Y	ENSG00000202461
TNFRSF8	ENSG00000120949
TNFRSF1B	ENSG00000028137
VPS13D	ENSG00000048707
U6atac	ENSG00000221340

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_04401	chr1:12011928-12013279	Brain_Anterior_Caudate
SE_05426	chr1:12011948-12013489	Brain_Cingulate_Gyrus
SE_06308	chr1:12011753-12013684	Brain_Hippocampus_Middle
SE_07453	chr1:12011839-12013808	Brain_Hippocampus_Middle_150
SE_08423	chr1:12012016-12013392	Brain_Inferior_Temporal_Lobe

Enhancer Sequence

GTGCCACTGC ACTCCAGCCT GGGCGACAGA GCGAGACATT GTCTTAAAAA TAAATAAATA 60
AATAAAGATG CAAATTCACA CACATCACTT AATGACTTTC CACTGCACGG AGAATAAAAT 120
CCACAGGCCT CTTTTCAACC TTAGATGGGG ATCTGCCATC TGCCCTCAAC AGACACTTTT 180
TTCCACTGGT CCAGAGTAAG CACAGTCCAG ATGGCCTTGC CCTGGCCCAG GCCCAGGAGT 240
AGGGATGTCC CATTGCTCTT GTGGTTGCTT GTCACCAGTC TGTACTCTAG CCAGGGGCCC 300
ATGTGGGCTT CCCCACTATG CCAGGTCTCA GCCCCCAAGG CACTCTGTGA GCTTGGCCCA 360
GCCTTTCCCT TCTCTGGGCC AGGTTTCCCA GATAACTGTA AAAAGGGACA CCAGGCCTGT 420
ATCCTCCCAG CCCTGCTCTC CAGGGGCTCC TCGTACAATC CGTTTCTTCA CCACCTATAT 480
GGTGCCCAGC ACTGAACAGT ACAGCTTAGT 510