EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS177-00113

Organism

Homo sapiens

Tissue/cell

SK-N-SH_RA

Coordinate

chr1:10856560-10856620

Target genes

Number: 11
Name	Ensembl ID

PGD	ENSG00000142657
APITD1	ENSG00000175279
PEX14	ENSG00000142655
DFFA	ENSG00000160049
AL139423.1	ENSG00000243267
CASZ1	ENSG00000130940
MASP2	ENSG00000009724
SRM	ENSG00000116649
EXOSC10	ENSG00000171824
U6	ENSG00000207451
RPL39P6	ENSG00000238173

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_23090	chr1:10853591-10857036	Colon_Crypt_1
SE_23754	chr1:10853609-10856738	Colon_Crypt_2
SE_24724	chr1:10853500-10857164	Colon_Crypt_3
SE_26723	chr1:10853285-10857186	Esophagus
SE_31374	chr1:10853131-10857215	Gastric
SE_33443	chr1:10849108-10857555	H2171
SE_40607	chr1:10853215-10857380	Left_Ventricle
SE_41555	chr1:10853779-10857132	LNCaP
SE_42099	chr1:10853154-10856817	Lung
SE_48119	chr1:10853181-10857365	Psoas_Muscle
SE_50332	chr1:10853655-10856856	Sigmoid_Colon
SE_52397	chr1:10853168-10856782	Small_Intestine
SE_59918	chr1:10814600-10857062	Ly4
SE_65281	chr1:10856397-10857228	Pancreatic_islets

Enhancer Sequence

AGGCCCGCGG AGCTGGGGGA CGTGGGGGGG CCGCGGCGGA GGGAGCGCCG AGTCTCTTAC 60