| Tag | Content |
|---|
EnhancerAtlas ID | HS177-00110 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr1:10700140-10700750 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| KLF16 | MA0741.1 | chr1:10700267-10700278 | GCCCCGCCCCC | + | 6.02 | | KLF5 | MA0599.1 | chr1:10700267-10700277 | GCCCCGCCCC | + | 6.02 | | NFIA | MA0670.1 | chr1:10700622-10700632 | GGTGCCAAGT | + | 6.02 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_02060 | chr1:10699767-10702438 | Aorta | | SE_26713 | chr1:10700008-10701553 | Esophagus | | SE_31374 | chr1:10699888-10702266 | Gastric | | SE_33519 | chr1:10699624-10704959 | H2171 | | SE_41555 | chr1:10699432-10702403 | LNCaP | | SE_42099 | chr1:10699601-10702392 | Lung | | SE_54510 | chr1:10699961-10702205 | Stomach_Smooth_Muscle |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I010640 | chr1 | 10700424 | 10700580 |
|
Enhancer Sequence | GCAGAAGAGG GACCCACGTG GGCACCATCA ACAGGGTTAC ACCCACATGG GACCCCTGAT 60
CTGGCATGGC GCCAGAGGGC GGCATTTAGG GAGCCCTCGG CTTCCCCTGG CTTGGGAGGC 120
CTCTCCTGCC CCGCCCCCTC CCTACCCTGG CACAGCAGGG GTCCTGGGCT TCCCCTCCTC 180
ATCCCTGTCT GCAGAAGGGC CACACAGGCC TCTCCCCCGG GGGGTGGCAG CCCAACCAGC 240
TCTGGGGGAC GTGGTGGCTG CTTCCTGGCC AGTTTGGGTG GGAAGTGAGG ACACGTCCTG 300
GCGCTAATTG AAGCTGAAGG GGGAATCTAG GTCGGCAGAG TGCAATTAGC CAAGTTGGAC 360
TCGGGCCAAG ACGCCAGCTA TAGCTGCCTC TAATGAGGGA CAGGCCGGCT CCTTTCCCGC 420
CGGCTACCCG GCTTCCCTGG CTGCGCCTGT CTGCACAGGG GGAGCTGCCT ACTCACAGTA 480
GGGGTGCCAA GTGCCCCAGG GCTGTGCGGG GCTGCAACTC CCTGCCCTAA GGAGCACCTT 540
GTCCTTGGTA CCAGAAGGTT CTTTAAGGTC TTGTTGGGGT TTTCTACCCC AAGGGCTGGG 600
AGAGGGCAGC 610
|
