| Tag | Content |
|---|
EnhancerAtlas ID | HS177-00097 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr1:8949600-8950420 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CEBPA | MA0102.3 | chr1:8949603-8949614 | TATTATGCAAT | - | 6.02 | | IRF1 | MA0050.2 | chr1:8950345-8950366 | TTTTTCTTTTTCTTTTTTTTT | + | 6.09 |
|
| | Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
| SE_10095 | chr1:8949298-8949932 | CD14 | | SE_10095 | chr1:8949953-8950644 | CD14 | | SE_24627 | chr1:8950092-8950345 | Colon_Crypt_2 | | SE_27088 | chr1:8949121-8950731 | Esophagus | | SE_29363 | chr1:8949167-8950114 | Fetal_Intestine_Large | | SE_30509 | chr1:8949331-8950649 | Fetal_Muscle | | SE_34103 | chr1:8949014-8951315 | HCC1954 | | SE_34433 | chr1:8949046-8951619 | HCT-116 | | SE_34916 | chr1:8948890-8951553 | HeLa | | SE_36553 | chr1:8948928-8950994 | HMEC | | SE_42834 | chr1:8949081-8951314 | Lung | | SE_46612 | chr1:8949058-8951353 | Osteoblasts | | SE_47312 | chr1:8948889-8950974 | Panc1 | | SE_53985 | chr1:8950030-8950630 | Spleen | | SE_56056 | chr1:8948952-8950757 | u87 | | SE_67633 | chr1:8948952-8950757 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I008889 | chr1 | 8949136 | 8951212 |
|
Enhancer Sequence | GACTATTATG CAATAAAGGG AATAGACCTA GTCTTTGTGG CTCCAGAGAT GAGGACGACT 60
ACAGAGAGCA TTCCCAGGGA GGCCGAGGGC ATCTCAGTTT CAGAGAAGAA ACCATTTCCA 120
AGATGACATG GTGTTTCCAT GTCATCTTGG TTCAGGAGGG GCTGTTCTGG AGAGGCTGGG 180
GGCCCTCTGT AGGAGGGTCT GGAGAATTCC AACATCTGAA GGCTGCAGTT CGGGGCTTTA 240
CCGTAAACAC ACACACACAC ACACACAATA TACACACACT ATATATATGC ATATATGTAT 300
GCATATATGT ATAATATATA TTTAAAGCAA ACTAAACTTA CTTTCCATTC GTTTAAGATC 360
TTTAGAATAT CTCTGAGATT ATTTGTGAAA CCTCAAGATT AAAAAAATAA CAACGACAAG 420
AAACAAGGCT AAGAATCAAC ATCCCAGGCT CCTGCCTCTT ATTCTATTAA CCACAGAAAT 480
TAAGTTCCGC AAAGACAAAG ATGCTTCTGT TACTTCCCAA TTAGTCTGCC CTGTTTGGAC 540
ACAGTCCCAG ACCTCATACC CCGGAGCCTA CGCACGGACT CCTGGCAAGA GAGGCGCCAT 600
CCCAGGCCCA GTGCCAGGGC TCCTCTCTCG GTCCTGTCCT CAGGGTGTCC TTGGGCTCCT 660
TCTGGACAGA GGCTCTTCCC TCTCCTGCCA GGTCCTCAGA TCCGAACTCC CTAAGCAGGG 720
GCTTATGTCT TGCCAGTGCT TCTTGTTTTT CTTTTTCTTT TTTTTTTTTT TGAGACGGAG 780
TCTCGCTCTC TCAAAAAAAA AAAAAAAAAA ATCAAATGGG 820
|
