| Tag | Content |
|---|
EnhancerAtlas ID | HS177-00016 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH_RA |
Coordinate | chr1:2201670-2202370 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RARA | MA0729.1 | chr1:2202086-2202104 | AAGGTGAAAAGTTCAGGC | + | 6.61 | | TFAP2C | MA0524.2 | chr1:2202307-2202319 | TGCCCCAGGGCA | - | 6.44 | | TFAP2C | MA0524.2 | chr1:2202307-2202319 | TGCCCCAGGGCA | + | 7.22 | | ZNF263 | MA0528.1 | chr1:2202164-2202185 | CCCTCCCGCTTCCCTTCCTCT | - | 6.28 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_17322 | chr1:2201358-2202641 | CD4p_CD25-_CD45RAp_Naive | | SE_18345 | chr1:2201742-2202650 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19191 | chr1:2201651-2202804 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_31962 | chr1:2201550-2203069 | Gastric | | SE_41586 | chr1:2201365-2203621 | LNCaP | | SE_46124 | chr1:2201321-2202610 | Osteoblasts | | SE_68719 | chr1:2201457-2203804 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I002270 | chr1 | 2201439 | 2203406 |
|
Enhancer Sequence | CTGGCGCTGC GTCTGGGTTC GGTCCTGGAC CTGCTGCGTG TTATCCTCCC TGCGGGCCTG 60
GCATGGGAGT AGGGGCTGAG AGATGCTGGT GACACCACTC TGACGCCACG GCCTGAGGCA 120
GCCGTTGGAC AGTGCCCATC TTGAATGCAG CCCTGGTGAC CTGAAGCCCC TGCGTTGGTC 180
CCTCACAGGC CAGGGGGTGT GGCCACAGGG CCTGGGCTTT GTCCCGTTTA CGAGAGGTCA 240
GGCGGTCACA GGGTAATGGG AGGCCTGTGG TTCCTGGGCT GCCATCTGGC GATTGTAAAA 300
CGGGCAGTGT GCAGTGTTGA GGGGGCGCTG GGGAAACAAG CTGCCGGCTG AGGAGGCCGC 360
ACTCCCCGTG CCTCCCGGGC AGACACCTCA CGGCCTTTCT CTGGGTGTCT GAACCCAAGG 420
TGAAAAGTTC AGGCTGTCCC TGCTCTCCAG AGGGGCTGGA GGTGGGGCGG GAGCAGAGAC 480
TGGACCTGGC CAGCCCCTCC CGCTTCCCTT CCTCTGGGCC CCTGGACTCT GGGGGCGAGG 540
GCAGGGCTGT TTGGCTGTTG GACATCCTTG CTGTCCCTTT GCTGGACTCT CCAGAGGACC 600
AGCATGGAGG TGCACAAGTT CACATTTGTC CCTCTCCTGC CCCAGGGCAC CTGGCCCTGT 660
CCCGGGCCAC CCCAGGCTGG ACCAGCTGCC CATGTCACCA 700
|
